Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-403
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 103

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 2-431
Cow position:
Alignm length: 445
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 45

Conread position: 6-431
Cow position:
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 56

Conread position: 10-430
Cow position:
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 11-430
Cow position:
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 12-431
Cow position:
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 13-429
Cow position:
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 15-240
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 32

Conread position: 15-396
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 19-431
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 23-242
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 14

Conread position: 37-415
Cow position:
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-427
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 43-431
Cow position:
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 84-400
Cow position:
Alignm length: 336
Alignm identity: 231
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 228

Conread position: 85-431
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 11

Conread position: 96-374
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 60, 30

Conread position: 110-296
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 110-338
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 49

Conread position: 110-389
Cow position:
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 200

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 86

Conread position: 110-431
Cow position:
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 110-431
Cow position:
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 110-431
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 51

Conread position: 112-316
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 85

Conread position: 112-424
Cow position:
Alignm length: 321
Alignm identity: 235
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 102

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 112-431
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 199

Conread position: 112-431
Cow position:
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 282

Conread position: 112-431
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 112-431
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 236

Conread position: 112-431
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 112-431
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 276

Conread position: 116-431
Cow position:
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 216

Conread position: 121-430
Cow position:
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 269

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-430
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 233

Conread position: 122-404
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 122

Conread position: 122-430
Cow position:
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 281

Conread position: 122-431
Cow position:
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 271

Conread position: 139-431
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 242

Conread position: 175-427
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 235

Conread position: 180-430
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 124, 59

Conread position: 232-431
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 6, 163

Conread position: 251-431
Cow position:
Alignm length: 182
Alignm identity: 150
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 125, 155

Show alignments to all cow chromosomes.