Cow genome map
| Conread name: | rtra01_c16r1.y1 |
| Conread position: | 1-430 |
| Cow position: | chr12:23140876-23140444 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 15-429 |
| Cow position: | chr12:27931602-27931182 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 15-431 |
| Cow position: | chr12:42858233-42857807 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 19-426 |
| Cow position: | chr12:20996782-20996364 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 31-431 |
| Cow position: | chr12:1776634-1776237 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 43-431 |
| Cow position: | chr12:22204377-22203985 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 82-431 |
| Cow position: | chr12:11099597-11099962 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 82-431 |
| Cow position: | chr12:27854592-27854237 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 96-430 |
| Cow position: | chr12:24994580-24994236 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 292 |
| Conread position: | 110-368 |
| Cow position: | chr12:17967210-17967481 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 110-431 |
| Cow position: | chr12:21210062-21210391 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 278 |
| Conread position: | 111-431 |
| Cow position: | chr12:28005284-28005599 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 112-430 |
| Cow position: | chr12:3362341-3362661 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 112-430 |
| Cow position: | chr12:21429408-21429735 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 275 |
| Conread position: | 120-431 |
| Cow position: | chr12:6405228-6404911 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 139 |
| Conread position: | 139-301 |
| Cow position: | chr12:20844023-20844191 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 175-431 |
| Cow position: | chr12:3209446-3209697 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 49 |
| Conread position: | 175-431 |
| Cow position: | chr12:20461758-20461502 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 211 |
| Conread position: | 178-431 |
| Cow position: | chr12:25099000-25098748 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 179-431 |
| Cow position: | chr12:21253109-21252858 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 181-431 |
| Cow position: | chr12:43913317-43913566 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 257-431 |
| Cow position: | chr12:33120964-33121145 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.