Cow genome map
| Conread name: | rtra01_c16r1.y1 |
| Conread position: | 1-431 |
| Cow position: | chr16:12537332-12536913 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 2-431 |
| Cow position: | chr16:23535290-23534862 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 6-431 |
| Cow position: | chr16:16270529-16270098 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 13-429 |
| Cow position: | chr16:2410322-2409897 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 13-431 |
| Cow position: | chr16:10438871-10439297 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 15-242 |
| Cow position: | chr16:23251811-23251573 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 15-295 |
| Cow position: | chr16:406423-406132 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 27, 22 |
| Conread position: | 15-431 |
| Cow position: | chr16:837932-838351 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 15-431 |
| Cow position: | chr16:1432804-1433223 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 15-431 |
| Cow position: | chr16:1566834-1566425 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 15-431 |
| Cow position: | chr16:7675835-7675419 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 15-431 |
| Cow position: | chr16:15567873-15568296 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 15-431 |
| Cow position: | chr16:16228938-16229346 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 15-431 |
| Cow position: | chr16:40295546-40295128 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 15-431 |
| Cow position: | chr16:54324722-54324290 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 72 |
| Conread position: | 18-431 |
| Cow position: | chr16:25342588-25343010 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 25-431 |
| Cow position: | chr16:37480229-37479817 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 37-431 |
| Cow position: | chr16:23983940-23984341 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 37-431 |
| Cow position: | chr16:27732742-27732343 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 84-431 |
| Cow position: | chr16:2238080-2237732 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 84-431 |
| Cow position: | chr16:19149911-19149563 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 73 |
| Conread position: | 85-430 |
| Cow position: | chr16:51084840-51085195 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 85-431 |
| Cow position: | chr16:15185763-15186117 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 88-431 |
| Cow position: | chr16:33218-33570 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 151 |
| Conread position: | 88-431 |
| Cow position: | chr16:51403190-51402837 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 218 |
| Conread position: | 95-430 |
| Cow position: | chr16:18667082-18667420 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 212 |
| Conread position: | 106-431 |
| Cow position: | chr16:5485436-5485762 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 110-372 |
| Cow position: | chr16:16898169-16898435 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 110-390 |
| Cow position: | chr16:32937231-32937513 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 169 |
| Conread position: | 110-431 |
| Cow position: | chr16:1860943-1861274 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 293 |
| Conread position: | 110-431 |
| Cow position: | chr16:3330648-3330968 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 110-431 |
| Cow position: | chr16:23671415-23671747 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 112-430 |
| Cow position: | chr16:40557234-40556897 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 112-431 |
| Cow position: | chr16:2726502-2726176 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 279 |
| Conread position: | 112-431 |
| Cow position: | chr16:10374885-10374563 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 112-431 |
| Cow position: | chr16:20202686-20203014 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 112-431 |
| Cow position: | chr16:25442342-25442668 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 306 |
| Conread position: | 112-431 |
| Cow position: | chr16:28470359-28470023 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 291 |
| Conread position: | 121-336 |
| Cow position: | chr16:49255511-49255287 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 121-373 |
| Cow position: | chr16:16520048-16519788 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 140 |
| Conread position: | 121-388 |
| Cow position: | chr16:2482414-2482137 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 161 |
| Conread position: | 121-428 |
| Cow position: | chr16:49221184-49220882 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 121-429 |
| Cow position: | chr16:41762546-41762855 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 121-430 |
| Cow position: | chr16:3088484-3088166 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 266 |
| Conread position: | 121-430 |
| Cow position: | chr16:19778929-19778614 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 121-430 |
| Cow position: | chr16:27594227-27594545 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 266 |
| Conread position: | 121-431 |
| Cow position: | chr16:8815385-8815069 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 174 |
| Conread position: | 121-431 |
| Cow position: | chr16:10967369-10967063 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 121-431 |
| Cow position: | chr16:14665093-14664774 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 297 |
| Conread position: | 121-431 |
| Cow position: | chr16:25456761-25456442 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 299 |
| Conread position: | 122-430 |
| Cow position: | chr16:16240566-16240256 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 142-431 |
| Cow position: | chr16:25258544-25258841 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 151-360 |
| Cow position: | chr16:29034697-29034908 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 250-431 |
| Cow position: | chr16:23251112-23250942 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 127 |
Show alignments to all cow chromosomes.