Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-431
Cow position:
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 46

Conread position: 2-431
Cow position:
Alignm length: 441
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 6-431
Cow position:
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 21

Conread position: 13-429
Cow position:
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 13-431
Cow position:
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 15-242
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 58

Conread position: 15-295
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 15

Conread position: 15-431
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 15-431
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 15-431
Cow position:
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 58

Conread position: 15-431
Cow position:
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 18-431
Cow position:
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 25-431
Cow position:
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 37-431
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 84-431
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 84-431
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 73

Conread position: 85-430
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 85-431
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 88-431
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 88-431
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 218

Conread position: 95-430
Cow position:
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 212

Conread position: 106-431
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-372
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 110-390
Cow position:
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 169

Conread position: 110-431
Cow position:
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 293

Conread position: 110-431
Cow position:
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 49

Conread position: 110-431
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 52

Conread position: 112-430
Cow position:
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 112-431
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 279

Conread position: 112-431
Cow position:
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 129

Conread position: 112-431
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 112-431
Cow position:
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 306

Conread position: 112-431
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 291

Conread position: 121-336
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 121-373
Cow position:
Alignm length: 262
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 121-388
Cow position:
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 161

Conread position: 121-428
Cow position:
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 121-429
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 38

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 266

Conread position: 121-431
Cow position:
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 121-431
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 42

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 297

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 299

Conread position: 122-430
Cow position:
Alignm length: 316
Alignm identity: 221
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 37, 124

Conread position: 142-431
Cow position:
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 151-360
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 250-431
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 127

Show alignments to all cow chromosomes.