Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-397
Cow position:
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 1-430
Cow position:
Alignm length: 437
Alignm identity: 280
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 84

Conread position: 2-429
Cow position:
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 9-430
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 10-345
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 9, 70

Conread position: 13-431
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 7

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 18-431
Cow position:
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 29

Conread position: 37-431
Cow position:
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-427
Cow position:
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 8

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 14

Conread position: 85-430
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 85-431
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 96-431
Cow position:
Alignm length: 346
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 106-294
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 11

Conread position: 106-431
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 19

Conread position: 106-431
Cow position:
Alignm length: 339
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-299
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 84

Conread position: 110-427
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 263

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 202

Conread position: 110-430
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 12, 8

Conread position: 112-430
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 68

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 280

Conread position: 112-431
Cow position:
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 112-431
Cow position:
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 238

Conread position: 118-431
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 9

Conread position: 121-283
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 76

Conread position: 121-388
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 253, 33

Conread position: 121-427
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-431
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 287

Conread position: 121-431
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 121-431
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 12

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 254

Conread position: 121-431
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 264

Conread position: 121-431
Cow position:
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 295

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 185

Conread position: 133-431
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 26

Conread position: 151-431
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 21

Conread position: 186-431
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 220

Conread position: 243-430
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 0

Conread position: 275-431
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 102, 117

Conread position: 275-431
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 52

Conread position: 282-430
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 15

Show alignments to all cow chromosomes.