Cow genome map


           Conread name:
           rtra01_c16r1.y1
        

               Conread position:
               7-431
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               10-315
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               13-431
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               7, 35
               

               Conread position:
               15-431
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               15-431
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               31-429
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               37-431
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               37-431
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               81-430
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               85-336
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               85-430
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               85-431
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 252
               

               Conread position:
               87-431
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               100-428
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               110-334
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               110-431
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               112-380
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               112-389
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 218
               

               Conread position:
               112-430
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               112-431
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 284
               

               Conread position:
               112-431
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               245
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               47, 137
               

               Conread position:
               121-431
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 195
               

               Conread position:
               121-431
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 272
               

               Conread position:
               128-431
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 247
               

               Conread position:
               130-430
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 236
               
Show alignments to all cow chromosomes.