Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 9-390
Cow position: chr20:27870558-27870957 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 15-430
Cow position: chr20:15293351-15293767 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 32

Conread position: 15-431
Cow position: chr20:5536305-5536731 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 15-431
Cow position: chr20:25849459-25849043 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 15-431
Cow position: chr20:28162192-28162612 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 42

Conread position: 15-431
Cow position: chr20:29949891-29950312 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 27-421
Cow position: chr20:8972798-8972401 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 43-431
Cow position: chr20:17660346-17659957 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 14

Conread position: 47-430
Cow position: chr20:30686968-30687371 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 60-431
Cow position: chr20:35126067-35126443 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 24

Conread position: 84-431
Cow position: chr20:21717857-21718221 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 85-431
Cow position: chr20:20753369-20753032 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 16

Conread position: 110-282
Cow position: chr20:19356224-19356398 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 0

Conread position: 112-349
Cow position: chr20:12569962-12570215 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 112-431
Cow position: chr20:15096434-15096106 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 112-431
Cow position: chr20:16178304-16177961 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 296

Conread position: 112-431
Cow position: chr20:19439375-19439703 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 120-429
Cow position: chr20:23800352-23800669 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 103

Conread position: 120-431
Cow position: chr20:9547115-9547433 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 172

Conread position: 121-430
Cow position: chr20:20441483-20441165 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 121-430
Cow position: chr20:30429739-30430058 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 267

Conread position: 121-431
Cow position: chr20:9344424-9344733 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 121-431
Cow position: chr20:23468198-23467881 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 270

Conread position: 129-431
Cow position: chr20:13678364-13678053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 273

Conread position: 140-431
Cow position: chr20:24615412-24615124 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 192

Conread position: 151-430
Cow position: chr20:41364145-41363857 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 165

Conread position: 155-431
Cow position: chr20:15066957-15067238 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 203

Show alignments to all cow chromosomes.