Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-431
Cow position:
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 46

Conread position: 1-431
Cow position:
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 59

Conread position: 2-431
Cow position:
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 7-317
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 29

Conread position: 7-431
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 9-431
Cow position:
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 89

Conread position: 15-427
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-430
Cow position:
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 16-431
Cow position:
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 62

Conread position: 18-429
Cow position:
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 18-431
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 29

Conread position: 31-431
Cow position:
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 37-430
Cow position:
Alignm length: 406
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 36

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-380
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position:
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-431
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 85-431
Cow position:
Alignm length: 367
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 16

Conread position: 87-430
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-431
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 146

Conread position: 96-431
Cow position:
Alignm length: 343
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 101-431
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 152

Conread position: 106-431
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 110-305
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-431
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 186

Conread position: 110-431
Cow position:
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 112-267
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 18

Conread position: 112-285
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 112-429
Cow position:
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 263

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 281

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 275

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 121

Conread position: 117-428
Cow position:
Alignm length: 315
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 69

Conread position: 117-431
Cow position:
Alignm length: 324
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 228

Conread position: 121-285
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 121-427
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 116

Conread position: 121-431
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 54

Conread position: 122-431
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 285

Conread position: 123-431
Cow position:
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 132-356
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 106, 66

Conread position: 151-431
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 221

Conread position: 151-431
Cow position:
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 168-431
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 74

Conread position: 251-431
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 42

Show alignments to all cow chromosomes.