Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 1-403
Cow position:
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 18

Conread position: 7-431
Cow position:
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 8-429
Cow position:
Alignm length: 430
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 8-430
Cow position:
Alignm length: 428
Alignm identity: 273
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 136, 60

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 15-431
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 24-431
Cow position:
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 29-430
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 37-431
Cow position:
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 42-431
Cow position:
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 15

Conread position: 43-431
Cow position:
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 14

Conread position: 82-431
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 297

Conread position: 82-431
Cow position:
Alignm length: 361
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 14

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 83-431
Cow position:
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 304

Conread position: 100-431
Cow position:
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 288

Conread position: 106-431
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 12

Conread position: 108-430
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 7

Conread position: 110-322
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 110-405
Cow position:
Alignm length: 305
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 114

Conread position: 110-430
Cow position:
Alignm length: 333
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 227

Conread position: 110-431
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 101

Conread position: 110-431
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 38

Conread position: 110-431
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 238

Conread position: 110-431
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 111-431
Cow position:
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 279

Conread position: 112-271
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 31

Conread position: 112-325
Cow position:
Alignm length: 225
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 112-415
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 252

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 263

Conread position: 112-430
Cow position:
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 198

Conread position: 112-431
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 136

Conread position: 112-431
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 68

Conread position: 117-430
Cow position:
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 117-430
Cow position:
Alignm length: 322
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 121-429
Cow position:
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 119

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-431
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 38

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 284

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 273

Conread position: 151-431
Cow position:
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 153-431
Cow position:
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 178

Conread position: 226-431
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 92

Conread position: 229-431
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 7

Conread position: 231-428
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 78

Conread position: 251-431
Cow position:
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 125, 0

Conread position: 255-431
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.