Cow genome map
| Conread name: | rtra01_c16r1.y1 |
| Conread position: | 1-431 |
| Cow position: | chr25:13782392-13782823 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 41 |
| Conread position: | 7-431 |
| Cow position: | chr25:12941328-12940897 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 10-431 |
| Cow position: | chr25:19339251-19338824 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 15-431 |
| Cow position: | chr25:18273420-18273012 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 20-399 |
| Cow position: | chr25:17559208-17558820 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 27-429 |
| Cow position: | chr25:26928646-26929050 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 37-431 |
| Cow position: | chr25:18888367-18887968 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 37-431 |
| Cow position: | chr25:20631001-20631400 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 82-430 |
| Cow position: | chr25:34345577-34345230 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 87-430 |
| Cow position: | chr25:20346559-20346208 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 96-295 |
| Cow position: | chr25:30757046-30756844 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 97-277 |
| Cow position: | chr25:14957022-14956840 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 106-389 |
| Cow position: | chr25:22148985-22149278 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 110-430 |
| Cow position: | chr25:13062264-13061935 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 277 |
| Conread position: | 110-430 |
| Cow position: | chr25:27523162-27522851 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 110-430 |
| Cow position: | chr25:32580968-32581297 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 278 |
| Conread position: | 110-431 |
| Cow position: | chr25:16924958-16924627 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 241 |
| Conread position: | 111-431 |
| Cow position: | chr25:11931345-11931008 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 111-431 |
| Cow position: | chr25:19921991-19922316 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 272 |
| Conread position: | 112-298 |
| Cow position: | chr25:18192312-18192115 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 112-430 |
| Cow position: | chr25:25508154-25508482 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 277 |
| Conread position: | 121-424 |
| Cow position: | chr25:18486108-18485798 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 248 |
| Conread position: | 121-430 |
| Cow position: | chr25:13693211-13692893 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 266 |
| Conread position: | 194-429 |
| Cow position: | chr25:35627905-35627674 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 269-430 |
| Cow position: | chr25:33664507-33664349 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 107, 93 |
| Conread position: | 286-431 |
| Cow position: | chr25:13958435-13958583 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.