Cow genome map
| Conread name: | rtra01_c16r1.y1 |
| Conread position: | 1-270 |
| Cow position: | chr27:16552180-16552455 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 1-431 |
| Cow position: | chr27:5912232-5912644 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 35 |
| Conread position: | 7-431 |
| Cow position: | chr27:13898611-13899040 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 13-430 |
| Cow position: | chr27:15636042-15635615 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 15-431 |
| Cow position: | chr27:4980675-4981101 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 15-431 |
| Cow position: | chr27:12748341-12748766 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 37-431 |
| Cow position: | chr27:26326391-26326790 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 42-431 |
| Cow position: | chr27:3234193-3233793 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 82-431 |
| Cow position: | chr27:8199180-8199537 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 82-431 |
| Cow position: | chr27:19524926-19525275 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 14 |
| Conread position: | 85-431 |
| Cow position: | chr27:9991834-9991487 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 87-426 |
| Cow position: | chr27:29056537-29056884 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 96-430 |
| Cow position: | chr27:798182-797839 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 291 |
| Conread position: | 106-431 |
| Cow position: | chr27:1210753-1211085 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 110-294 |
| Cow position: | chr27:23292662-23292848 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 110-333 |
| Cow position: | chr27:19260097-19260331 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 110-431 |
| Cow position: | chr27:26554026-26553716 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 111-431 |
| Cow position: | chr27:15274666-15274341 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 209 |
| Conread position: | 112-431 |
| Cow position: | chr27:1677170-1676844 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 121-430 |
| Cow position: | chr27:16032993-16032675 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 266 |
| Conread position: | 121-430 |
| Cow position: | chr27:25803285-25802966 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 282 |
| Conread position: | 121-431 |
| Cow position: | chr27:27664407-27664724 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 237 |
| Conread position: | 122-430 |
| Cow position: | chr27:167515-167200 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 263 |
| Conread position: | 158-355 |
| Cow position: | chr27:16264595-16264392 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 161-431 |
| Cow position: | chr27:10327275-10327000 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 238 |
| Conread position: | 229-431 |
| Cow position: | chr27:15035584-15035380 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 163 |
Show alignments to all cow chromosomes.