Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-430
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 1-430
Cow position:
Alignm length: 442
Alignm identity: 303
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 131, 58

Conread position: 2-431
Cow position:
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 6-431
Cow position:
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 9-403
Cow position:
Alignm length: 402
Alignm identity: 250
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 128

Conread position: 10-431
Cow position:
Alignm length: 441
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 15-236
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 61

Conread position: 15-430
Cow position:
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 15-430
Cow position:
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 15-430
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 46

Conread position: 15-431
Cow position:
Alignm length: 432
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 48

Conread position: 21-302
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 78

Conread position: 25-431
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 37-431
Cow position:
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 21

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 44-431
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 25

Conread position: 50-403
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 7

Conread position: 76-431
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 44

Conread position: 82-380
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 14

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 84-431
Cow position:
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 164

Conread position: 85-431
Cow position:
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 11

Conread position: 92-350
Cow position:
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 96-360
Cow position:
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 96-430
Cow position:
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 300

Conread position: 99-431
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 166

Conread position: 99-431
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 77

Conread position: 100-429
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 186

Conread position: 101-431
Cow position:
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 17

Conread position: 106-430
Cow position:
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 106-431
Cow position:
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 106-431
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 110-289
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 110-374
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 256

Conread position: 110-426
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 164

Conread position: 110-430
Cow position:
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 45

Conread position: 110-430
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-431
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 271

Conread position: 110-431
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 112-347
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 112-404
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 112-422
Cow position:
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 47

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 281

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 276

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 277

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 182

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 276

Conread position: 112-431
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 161

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 281

Conread position: 112-431
Cow position:
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 282

Conread position: 112-431
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 278

Conread position: 112-431
Cow position:
Alignm length: 331
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 49

Conread position: 116-431
Cow position:
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 121-427
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 198

Conread position: 121-429
Cow position:
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 266

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 124-431
Cow position:
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 268

Conread position: 141-350
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 151-431
Cow position:
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 241

Conread position: 200-431
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 219-431
Cow position:
Alignm length: 216
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 117

Conread position: 251-431
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 125, 133

Conread position: 257-431
Cow position:
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 119, 0

Show alignments to all cow chromosomes.