Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-431
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 49

Conread position: 2-431
Cow position:
Alignm length: 441
Alignm identity: 284
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 67

Conread position: 7-431
Cow position:
Alignm length: 438
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 40

Conread position: 7-431
Cow position:
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 15-431
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-431
Cow position:
Alignm length: 433
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 68

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 37-403
Cow position:
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-429
Cow position:
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 20

Conread position: 43-428
Cow position:
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 50-431
Cow position:
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 7

Conread position: 82-396
Cow position:
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 85-430
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 85-430
Cow position:
Alignm length: 356
Alignm identity: 245
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 103, 11

Conread position: 87-430
Cow position:
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 87-430
Cow position:
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 6

Conread position: 88-430
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 150

Conread position: 104-387
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 6

Conread position: 106-313
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 21

Conread position: 106-390
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 110-299
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 110-324
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 183

Conread position: 110-390
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 110-399
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 110-415
Cow position:
Alignm length: 318
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 290

Conread position: 110-430
Cow position:
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 278

Conread position: 110-431
Cow position:
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 112-430
Cow position:
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 267

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 206

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 215

Conread position: 112-430
Cow position:
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 206

Conread position: 112-430
Cow position:
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 278

Conread position: 112-431
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 238

Conread position: 121-391
Cow position:
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 121-403
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 125

Conread position: 121-430
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 68

Conread position: 121-430
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 263

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 267

Conread position: 121-430
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 265

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 182

Conread position: 121-431
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 72, 25

Conread position: 121-431
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 120

Conread position: 121-431
Cow position:
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 289

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 159

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 267

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 265

Conread position: 212-430
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 167

Conread position: 215-430
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 177

Conread position: 251-431
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 141

Conread position: 261-431
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 115, 0

Show alignments to all cow chromosomes.