Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-430
Cow position:
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 6-431
Cow position:
Alignm length: 435
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 25

Conread position: 9-431
Cow position:
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 38

Conread position: 10-397
Cow position:
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 13-431
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 13-431
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 22

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 15-431
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 43

Conread position: 15-431
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 16-431
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 19-431
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 8

Conread position: 22-431
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 15

Conread position: 37-431
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 82-236
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 10

Conread position: 82-430
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 14

Conread position: 82-431
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 82-431
Cow position:
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 87-427
Cow position:
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 87-430
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 87-430
Cow position:
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 96-403
Cow position:
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 210

Conread position: 100-427
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 287

Conread position: 106-403
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 110-342
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 110-430
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 293

Conread position: 110-430
Cow position:
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 279

Conread position: 110-431
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 58

Conread position: 112-350
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 232

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 275

Conread position: 112-430
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 274

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 112-431
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 274

Conread position: 116-405
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 117-430
Cow position:
Alignm length: 323
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 156

Conread position: 118-431
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 241

Conread position: 120-431
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 300

Conread position: 120-431
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 121-350
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 227
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 36, 182

Conread position: 121-430
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 121-431
Cow position:
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 121-431
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 59

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 240

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 38

Conread position: 144-431
Cow position:
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 257

Conread position: 145-431
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 188

Conread position: 151-387
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 90

Conread position: 151-431
Cow position:
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 211-431
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 67

Conread position: 213-427
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 26

Conread position: 238-431
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 138, 146

Conread position: 257-430
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 17

Show alignments to all cow chromosomes.