Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-373
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 12

Conread position: 1-431
Cow position:
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 99

Conread position: 2-410
Cow position:
Alignm length: 423
Alignm identity: 264
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 191, 67

Conread position: 2-415
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 2-431
Cow position:
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 2-431
Cow position:
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 34

Conread position: 2-431
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 44

Conread position: 2-431
Cow position:
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 6-427
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 10-422
Cow position:
Alignm length: 421
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 28

Conread position: 11-431
Cow position:
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 26

Conread position: 15-427
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-430
Cow position:
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 15-431
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 15-431
Cow position:
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 47

Conread position: 15-431
Cow position:
Alignm length: 427
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 54

Conread position: 18-390
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 18-431
Cow position:
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 19-431
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 29

Conread position: 34-431
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 40-431
Cow position:
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 10

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 85-263
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 11

Conread position: 85-431
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 90-431
Cow position:
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 163, 69

Conread position: 93-430
Cow position:
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 137

Conread position: 96-374
Cow position:
Alignm length: 285
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 121

Conread position: 96-430
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 278

Conread position: 105-406
Cow position:
Alignm length: 312
Alignm identity: 228
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 13

Conread position: 106-431
Cow position:
Alignm length: 340
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 21

Conread position: 110-427
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 49, 169

Conread position: 110-430
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 265

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position:
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 281

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 110-431
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 112-321
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 209

Conread position: 112-429
Cow position:
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 122

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 276

Conread position: 112-430
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 264

Conread position: 112-431
Cow position:
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 112-431
Cow position:
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 91

Conread position: 112-431
Cow position:
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 275

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 117-429
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 121-429
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 266

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 121-431
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 25

Conread position: 121-431
Cow position:
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 246

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 282

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 280

Conread position: 122-430
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 172

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 97

Conread position: 122-431
Cow position:
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 253

Conread position: 122-431
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 199

Conread position: 131-431
Cow position:
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 268

Conread position: 132-431
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 251

Conread position: 141-431
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 19, 66

Conread position: 167-431
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 210, 27

Conread position: 168-431
Cow position:
Alignm length: 275
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 232

Conread position: 215-431
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 123

Conread position: 239-431
Cow position:
Alignm length: 196
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 251-431
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 142

Show alignments to all cow chromosomes.