Cow genome map

Conread name: rtra01_c16r1.y1

Conread position: 1-381
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 140

Conread position: 1-431
Cow position:
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 1-431
Cow position:
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 2-345
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 45

Conread position: 7-431
Cow position:
Alignm length: 443
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 55

Conread position: 9-431
Cow position:
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 26

Conread position: 11-427
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 13-427
Cow position:
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 15-380
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 17

Conread position: 15-400
Cow position:
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-430
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 80

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 15-431
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 15-431
Cow position:
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 35

Conread position: 15-431
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 60

Conread position: 15-431
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 60

Conread position: 19-345
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 32

Conread position: 20-431
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 11

Conread position: 23-431
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 23-431
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 101

Conread position: 31-429
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 37-431
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 21

Conread position: 50-431
Cow position:
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 82-431
Cow position:
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 85-303
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 108, 11

Conread position: 87-393
Cow position:
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 9

Conread position: 95-430
Cow position:
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 96-431
Cow position:
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 155

Conread position: 106-431
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 110-331
Cow position:
Alignm length: 225
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 79

Conread position: 110-336
Cow position:
Alignm length: 235
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 65

Conread position: 110-399
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 134

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 277

Conread position: 110-430
Cow position:
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 110-431
Cow position:
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 110-431
Cow position:
Alignm length: 331
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 291

Conread position: 111-372
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 28

Conread position: 111-431
Cow position:
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 249

Conread position: 112-374
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 112-430
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 275

Conread position: 112-431
Cow position:
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 112-431
Cow position:
Alignm length: 341
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 182

Conread position: 112-431
Cow position:
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 281

Conread position: 115-291
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 121-387
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 105

Conread position: 121-390
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 39, 74

Conread position: 121-402
Cow position:
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 58

Conread position: 121-430
Cow position:
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 266

Conread position: 121-431
Cow position:
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 248

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 239

Conread position: 121-431
Cow position:
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 167

Conread position: 121-431
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 138

Conread position: 121-431
Cow position:
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 312

Conread position: 122-362
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 122-430
Cow position:
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 122-431
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 264

Conread position: 130-431
Cow position:
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 151-431
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 215

Conread position: 179-431
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 62

Conread position: 213-431
Cow position:
Alignm length: 225
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 39

Conread position: 224-431
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 112

Conread position: 240-430
Cow position:
Alignm length: 191
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.