Cow genome map


           Conread name:
           rtra05_e3r1.y1
        

               Conread position:
               1-260
               

               Cow position:
               chr6:44643278-44643531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               6-257
               

               Cow position:
               chr6:33398705-33398457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               15-260
               

               Cow position:
               chr6:32132625-32132883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               37-324
               

               Cow position:
               chr6:36498291-36498567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               40-256
               

               Cow position:
               chr6:38260650-38260427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               57, 196
               

               Conread position:
               88-325
               

               Cow position:
               chr6:11450074-11449838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               119-260
               

               Cow position:
               chr6:42045693-42045836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               144-271
               

               Cow position:
               chr6:41636794-41636667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.