Cow genome map
| Conread name: | unkn-MI-P-NA-afr-g-11-1-UM.s1 |
| Conread position: | 2-444 |
| Cow position: | chr15:10889314-10888849 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 3-449 |
| Cow position: | chr15:20356221-20356689 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 4-364 |
| Cow position: | chr15:14636269-14635878 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 276 |
| Conread position: | 6-430 |
| Cow position: | chr15:4927075-4926647 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 6-444 |
| Cow position: | chr15:31359576-31359118 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 6-449 |
| Cow position: | chr15:9003426-9003894 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 97 |
| Conread position: | 7-442 |
| Cow position: | chr15:2763358-2762912 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 306 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 162 |
| Conread position: | 11-444 |
| Cow position: | chr15:4197153-4196693 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 11-444 |
| Cow position: | chr15:20750081-20749621 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 12-450 |
| Cow position: | chr15:14581671-14582131 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 14-404 |
| Cow position: | chr15:6478835-6478441 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 108, 7 |
| Conread position: | 110-444 |
| Cow position: | chr15:4672010-4671669 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 199, 251 |
| Conread position: | 112-449 |
| Cow position: | chr15:3009279-3009627 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 113-444 |
| Cow position: | chr15:445178-444836 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr15:1518581-1518919 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr15:2647082-2647426 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr15:4142245-4142587 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr15:11597434-11597776 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-444 |
| Cow position: | chr15:18267414-18267756 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 113-444 |
| Cow position: | chr15:50123370-50123711 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 113-445 |
| Cow position: | chr15:17079637-17079973 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 201, 51 |
| Conread position: | 115-444 |
| Cow position: | chr15:50147637-50147298 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 199, 68 |
| Conread position: | 120-444 |
| Cow position: | chr15:1773064-1772729 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 122-416 |
| Cow position: | chr15:8750966-8750678 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 122-444 |
| Cow position: | chr15:28489584-28489917 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 122-444 |
| Cow position: | chr15:37393056-37392726 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 127-444 |
| Cow position: | chr15:1782782-1782454 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 144-444 |
| Cow position: | chr15:36971459-36971148 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 147-445 |
| Cow position: | chr15:24717626-24717319 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 160, 61 |
| Conread position: | 148-444 |
| Cow position: | chr15:31862024-31862322 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 246 |
| Conread position: | 166-449 |
| Cow position: | chr15:30811492-30811217 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 176-419 |
| Cow position: | chr15:328921-328679 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 186, 124 |
| Conread position: | 187-427 |
| Cow position: | chr15:32711592-32711341 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 187-447 |
| Cow position: | chr15:2012548-2012280 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 196-444 |
| Cow position: | chr15:1882015-1882275 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 202-450 |
| Cow position: | chr15:6067691-6067948 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 24 |
| Conread position: | 219-444 |
| Cow position: | chr15:38981137-38980901 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 238-449 |
| Cow position: | chr15:6623533-6623318 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 239-444 |
| Cow position: | chr15:789125-789341 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 239-444 |
| Cow position: | chr15:21466318-21466102 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.