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TXT2COLSection: User Commands (1)Updated: September 2000 Index Return to Main Contents NAMEtxt2col - convert text format to col format.SYNOPSIS
DESCRIPTIONtxt2col converts text format to col format. The text format looks like this:
First the name, then the sequence. Note that the first sequence has to have the name `pairing_mask'. Theis sequence specifies RNA structure. OPTIONStxt2col accepts the following option.
EXAMPLESConvert text file to col file with pairing mask as first entry.
BUGSThe program should work for other sequences than RNA and without the pairing mask.Report opther bugs to col-bugs@bioinf.au.dk. AUTHORBjarne Knudsen (bk@daimi.au.dk)SEE ALSO
IndexComments, questions, etc., email
gorodkin@rth.dk. |
Last updated March 26th, 2007 by Jan Gorodkin |