mirDBA: microRNA discovery by similarity search to a database of RNA-seq profiles
Supplementary Material
- 4,795 read profiles obtained after preprocessing of ENCODE dataset in blockbuster format.
- 2,540 read profiles (miRRPdb) obtained after preprocessing of miRBase dataset in blockbuster format.
- Benchmarking procedure to miRanalyzer.
Listed below are the profile alignment results for 250 ncRNA from ENCODE dataset (query) with miRNA from miRRPdb (subject)
Query | Subject | Score | Alignment |
hsa-mir-3155|chr10:6194169-6194231(+) | cqu-mir-988|supercont3.791:14291-14353(+) | 0.83 | |
hsa-mir-199a-1|chr19:10928102-10928169(-) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.71 | |
hsa-mir-3677|chr16:2320715-2320773(+) | tca-mir-219|chrLG3:7583070-7583129(+) | 0.83 | |
hsa-mir-193b|chr16:14397836-14397896(+) | bfl-mir-124|Bf_V2_32:1879934-1879995(+) | 0.82 | |
hsa-mir-589|chr7:5535464-5535527(-) | cbr-mir-64a|chrIII:218927-218991(-) | 0.76 | |
hsa-mir-3177|chr16:1784995-1785060(+) | osa-MIR398b|chr07:14597636-14597701(-) | 0.84 | |
hsa-mir-3940|chr19:6416444-6416500(-) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.87 | |
hsa-mir-324|chr17:7126624-7126683(-) | mmu-mir-190b|chr3:90070030-90070090(+) | 0.75 | |
hsa-mir-597|chr8:9599196-9599260(+) | hsa-mir-4636|chr5:9053936-9054000(-) | 0.82 | |
SNORA3_RF00334|chr16:2846407-2846475(-) | cel-mir-358|V:8580855-8580924(-) | 0.75 | |
hsa-mir-339|chr7:1062589-1062650(-) | hsa-mir-4766|chr22:41209895-41209955(-) | 0.73 | |
hsa-mir-212|chr17:1953580-1953644(-) | hsa-mir-3129|chr2:189997769-189997832(-) | 0.76 | |
hsa-mir-1909|chr19:1816166-1816223(-) | mmu-mir-3088|chr2:28733286-28733345(+) | 0.77 | |
hsa-mir-181c|chr19:13985538-13985601(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.76 | |
U6-related|chr4:3045864-3045930(+) | osa-MIR5525|chr09:3903322-3903385(-) | 0.70 | |
hsa-mir-132|chr17:1953220-1953282(-) | cel-mir-791|X:5809325-5809389(+) | 0.76 | |
tRNA_RF00005|chr8:11770800-11770876(+) | osa-MIR5538|chr10:21265771-21265854(+) | 0.70 | |
U7_RF00066|chr2:10884317-10884358(+) | osa-MIR5340|chr02:5683422-5683456(-) | 0.70 | |
hsa-mir-3143|chr6:27115347-27115429(+) | ath-MIR773a|chr1:13067254-13067334(+) | 0.76 | |
hsa-mir-580|chr5:36148007-36148069(-) | cel-mir-785|X:3004677-3004737(+) | 0.77 | |
U5F-related|chr12:31747077-31747140(-) | cel-mir-355|II:11833495-11833556(-) | 0.80 | |
hsa-mir-550a-1|chr7:30329429-30329491(+) | hsa-mir-1271|chr5:175794960-175795021(+) | 0.78 | |
hsa-mir-552|chr1:35135213-35135272(-) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.81 | |
hsa-mir-193a|chr17:29887034-29887090(+) | hsa-mir-1911|chrX:113997755-113997811(+) | 0.78 | |
hsa-mir-3605|chr1:33798004-33798075(-) | cel-mir-1830|II:4371842-4371911(-) | 0.72 | |
hsa-mir-423|chr17:28444112-28444172(+) | mmu-mir-3067|chr12:81166165-81166225(+) | 0.78 | |
hsa-mir-3934|chr6:33665926-33665989(+) | mmu-mir-3108|chr8:108936867-108936931(+) | 0.74 | |
hsa-mir-579|chr5:32394493-32394561(-) | hsa-mir-548w|chr16:26036563-26036629(+) | 0.73 | |
hsa-mir-550a-2|chr7:32772612-32772674(+) | hsa-mir-1271|chr5:175794960-175795021(+) | 0.78 | |
hsa-mir-624|chr14:31483874-31483935(-) | mmu-mir-3105|chr7:144009267-144009327(+) | 0.74 | |
hsa-mir-876|chr9:28863631-28863694(-) | tca-mir-3811e|chrLG1:8499630-8499695(+) | 0.77 | |
hsa-mir-221|chrX:45605604-45605671(-) | hsa-mir-3200|chr22:31127553-31127621(+) | 0.70 | |
hsa-mir-1293|chr12:50627926-50627990(-) | hsa-mir-1247|chr14:102026660-102026723(-) | 0.75 | |
hsa-mir-502|chrX:49779218-49779281(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.77 | |
hsa-mir-659|chr22:38243698-38243761(-) | hsa-mir-519b|chr19:54198478-54198538(+) | 0.80 | |
hsa-mir-425|chr3:49057592-49057654(-) | bmo-mir-927|nscaf2575:1011465-1011526(+) | 0.72 | |
hsa-mir-30e|chr1:41220041-41220107(+) | tca-mir-3811c-2|chrLG1:8498728-8498793(+) | 0.73 | |
hsa-mir-30c-1|chr1:41222950-41223033(+) | hsa-mir-518c|chr19:54211992-54212072(+) | 0.72 | |
28S_rRNA-related|chr8:46951922-46952002(-) | ame-mir-3801|Group2.36:214336-214417(+) | 0.70 | |
hsa-mir-627|chr15:42491788-42491850(-) | cel-mir-791|X:5809325-5809389(+) | 0.76 | |
hsa-mir-147b|chr15:45725258-45725319(+) | bmo-mir-993b|nscaf2734:2638-2699(-) | 0.81 | |
hsa-mir-3617|chr20:44333788-44333829(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.88 | |
SNORD65_RF00571|chr8:41284203-41284244(+) | ath-MIR5645f|chr5:14946892-14946931(-) | 0.70 | |
hsa-mir-500a|chrX:49773048-49773113(+) | hsa-mir-96|chr7:129414538-129414603(-) | 0.71 | |
hsa-mir-660|chrX:49777862-49777923(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.77 | |
hsa-mir-188|chrX:49768121-49768183(+) | hsa-mir-1271|chr5:175794960-175795021(+) | 0.74 | |
hsa-mir-330|chr19:46142263-46142328(-) | cel-mir-791|X:5809325-5809389(+) | 0.77 | |
hsa-mir-3616|chr20:45795626-45795689(+) | cbr-mir-46|chrIII:7878510-7878572(+) | 0.78 | |
hY4_RNA-related|chr13:40359594-40359633(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.74 | |
hsa-mir-501|chrX:49774341-49774404(+) | hsa-mir-34b|chr11:111383673-111383736(+) | 0.76 | |
hsa-mir-129-2|chr11:43602957-43603021(+) | osa-MIR5525|chr09:3903322-3903385(-) | 0.79 | |
hsa-mir-769|chr19:46522240-46522280(+) | osa-MIR1882g|chr11:20362607-20362645(+) | 0.76 | |
hsa-mir-642a|chr19:46178199-46178257(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.87 | |
hsa-mir-33a|chr22:42296951-42297014(+) | bmo-mir-2792|nscaf2734:1230780-1230844(+) | 0.77 | |
hsa-mir-1283-2|chr19:54261498-54261559(+) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.83 | |
hsa-mir-99b|chr19:52195870-52195931(+) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.81 | |
hsa-mir-520a|chr19:54194148-54194207(+) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.87 | |
hsa-mir-520b|chr19:54204481-54204544(+) | cqu-mir-988|supercont3.791:14291-14353(+) | 0.83 | |
hsa-mir-527|chr19:54257284-54257345(+) | mmu-mir-3105|chr7:144009267-144009327(+) | 0.78 | |
hsa-mir-628|chr15:55665149-55665211(-) | hsa-mir-4766|chr22:41209895-41209955(-) | 0.74 | |
hsa-mir-519c|chr19:54189736-54189799(+) | hsa-mir-3189|chr19:18497380-18497441(+) | 0.83 | |
hsa-mir-518c|chr19:54212011-54212072(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.78 | |
hsa-mir-526b|chr19:54197659-54197718(+) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.85 | |
hsa-mir-518a-2|chr19:54242600-54242661(+) | hsa-mir-154|chr14:101526103-101526164(+) | 0.80 | |
hsa-mir-518d|chr19:54238143-54238204(+) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.75 | |
hsa-mir-3614|chr17:54968598-54968702(-) | ppt-MIR1070|scaffold_109:1216104-1216181(+) | 0.71 | |
hsa-mir-519e|chr19:54183205-54183264(+) | hsa-mir-3144|chr6:120336336-120336394(+) | 0.75 | |
hsa-mir-643|chr19:52785070-52785132(+) | hsa-mir-624|chr14:31483864-31483925(-) | 0.83 | |
hsa-mir-522|chr19:54254477-54254541(+) | hsa-mir-512-1|chr19:54169944-54170005(+) | 0.79 | |
hsa-mir-1296|chr10:65132728-65132793(-) | ppt-MIR1038|scaffold_8:1028806-1028870(+) | 0.79 | |
hsa-mir-605|chr10:53059345-53059404(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.86 | |
hsa-mir-518f|chr19:54203282-54203343(+) | mmu-mir-3070b|chr12:109588607-109588670(+) | 0.77 | |
hsa-mir-1468|chrX:63005895-63005955(-) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.85 | |
hsa-mir-520e|chr19:54178978-54179041(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.76 | |
SNORA11_RF00614|chrX:54953736-54953825(+) | bmo-mir-3229|nscaf2905:203343-203434(+) | 0.76 | |
hsa-mir-512-1|chr19:54169945-54170006(+) | hsa-mir-653|chr7:93112084-93112143(-) | 0.75 | |
hsa-mir-520c|chr19:54210719-54210783(+) | hsa-mir-200a|chr1:1103255-1103319(+) | 0.73 | |
5S_rRNA-related|chr1:52439097-52439138(+) | cre-MIR910|scaffold_17:966156-966199(+) | 0.72 | |
hsa-mir-1228|chr12:57588286-57588359(+) | spu-mir-2006|gb | 0.81 | |
hsa-mir-517b|chr19:54224334-54224395(+) | hsa-mir-624|chr14:31483864-31483925(-) | 0.81 | |
hsa-mir-512-2|chr19:54172429-54172490(+) | hsa-mir-653|chr7:93112084-93112143(-) | 0.75 | |
hsa-mir-217|chr2:56210117-56210178(-) | cbr-mir-51|chrIV:5734749-5734809(+) | 0.81 | |
hsa-mir-548u|chr6:57254941-57255001(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.87 | |
hsa-mir-520h|chr19:54245779-54245843(+) | tca-mir-3811e|chrLG1:8499630-8499695(+) | 0.76 | |
hsa-mir-519a-1|chr19:54255663-54255726(+) | hsa-mir-487a|chr14:101518792-101518852(+) | 0.75 | |
hsa-mir-216b|chr2:56227858-56227921(-) | hsa-mir-3173|chr14:95604257-95604321(-) | 0.77 | |
hsa-mir-582|chr5:58999453-58999515(-) | cqu-mir-1175|supercont3.86:866115-866178(+) | 0.81 | |
hsa-mir-142|chr17:56408604-56408666(-) | hsa-mir-202|chr10:135061038-135061099(-) | 0.72 | |
hsa-mir-523|chr19:54201651-54201715(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.76 | |
hsa-mir-518e|chr19:54233104-54233166(+) | mmu-mir-3070b|chr12:109588607-109588670(+) | 0.82 | |
hsa-mir-520d|chr19:54223363-54223424(+) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.77 | |
hsa-mir-519a-2|chr19:54265611-54265674(+) | cel-mir-49|X:9989244-9989306(+) | 0.76 | |
hsa-mir-517c|chr19:54244584-54244645(+) | bfl-mir-4859|Bf_V2_28:2310469-2310532(+) | 0.80 | |
hsa-mir-1237|chr11:64136120-64136175(+) | hsa-mir-3152|chr9:18573314-18573370(+) | 0.86 | |
hsa-mir-125a|chr19:52196498-52196545(+) | osa-MIR1846a|chr10:528282-528331(+) | 0.72 | |
hsa-mir-526a-1|chr19:54209517-54209579(+) | cqu-mir-1175|supercont3.86:866115-866178(+) | 0.75 | |
hsa-mir-518a-1|chr19:54234272-54234332(+) | hsa-mir-154|chr14:101526103-101526164(+) | 0.77 | |
hsa-mir-372|chr19:54291148-54291207(+) | hsa-mir-676|chrX:69242714-69242771(+) | 0.82 | |
hsa-mir-581|chr5:53247356-53247415(-) | hsa-mir-524|chr19:54214269-54214329(+) | 0.81 | |
hsa-mir-296|chr20:57392679-57392759(-) | hsa-mir-496|chr14:101526910-101526987(+) | 0.73 | |
hsa-mir-216a|chr2:56216114-56216176(-) | cbr-mir-46|chrIII:7878510-7878572(+) | 0.83 | |
hsa-mir-517a|chr19:54215535-54215598(+) | hsa-mir-487a|chr14:101518792-101518852(+) | 0.78 | |
28S_rRNA-related|chr16:81902036-81902100(-) | hsa-mir-1972-2|chr16:70064257-70064325(+) | 0.80 | |
hsa-mir-3615|chr17:72744765-72744826(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.79 | |
hsa-mir-326|chr11:75046150-75046231(-) | ppt-MIR1040|scaffold_62:1568574-1568657(+) | 0.74 | |
hsa-mir-3186|chr17:79418141-79418200(-) | cel-mir-4812|X:15242711-15242770(-) | 0.82 | |
hsa-mir-708|chr11:79113073-79113145(-) | cel-mir-358|V:8580855-8580924(-) | 0.74 | |
hsa-mir-1284|chr3:71591149-71591211(-) | ppt-MIR1062|scaffold_49:1228164-1228226(-) | 0.81 | |
hsa-mir-204|chr9:73424944-73424988(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.81 | |
U6-related|chrX:67759312-67759374(-) | mmu-mir-362|chrX:7241983-7242046(-) | 0.70 | |
hsa-mir-676|chrX:69242712-69242771(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.85 | |
U6-related|chr13:80943559-80943636(-) | bmo-mir-3385|scaffold772:8756-8831(+) | 0.72 | |
hsa-mir-361|chrX:85158643-85158707(-) | tca-mir-3811c-2|chrLG1:8498728-8498793(+) | 0.79 | |
hsa-mir-140|chr16:69967004-69967069(+) | mmu-mir-3070a|chr12:109587958-109588022(+) | 0.74 | |
hsa-mir-590|chr7:73605540-73605606(+) | mmu-mir-1264|chrX:147010614-147010679(+) | 0.74 | |
hsa-mir-1269|chr4:67142565-67142629(+) | cel-mir-49|X:9989244-9989306(+) | 0.83 | |
hsa-mir-1252|chr12:79813040-79813099(+) | hsa-mir-625|chr14:65937834-65937894(+) | 0.83 | |
hsa-mir-629|chr15:70371724-70371787(-) | hsa-mir-362|chrX:49773573-49773635(+) | 0.74 | |
hsa-mir-3664|chr11:70718389-70718454(-) | crm-mir-71|Crem_Contig68:372790-372850(-) | 0.74 | |
hsa-mir-3126|chr2:69330822-69330882(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.82 | |
hsa-mir-374a|chrX:73507127-73507182(-) | hsa-mir-885|chr3:10436178-10436236(-) | 0.72 | |
hsa-mir-545|chrX:73506959-73507022(-) | cqu-mir-1175|supercont3.86:866115-866178(+) | 0.76 | |
hsa-mir-421|chrX:73438224-73438284(-) | bmo-mir-993b|nscaf2734:2638-2699(-) | 0.74 | |
hsa-mir-548l|chr11:94199673-94199733(-) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.79 | |
hsa-mir-493|chr14:101335409-101335475(+) | mmu-mir-216a|chr11:28757016-28757080(+) | 0.76 | |
hsa-mir-329-1|chr14:101493112-101493193(+) | osa-MIR5538|chr10:21265771-21265854(+) | 0.76 | |
hsa-mir-409|chr14:101531650-101531707(+) | mmu-mir-3072|chr12:109747893-109747951(+) | 0.72 | |
hsa-mir-411|chr14:101489675-101489732(+) | tca-mir-315|chrLG1:1751226-1751284(+) | 0.82 | |
hsa-mir-135a-2|chr12:97957610-97957671(+) | bmo-mir-927|nscaf2575:1011465-1011526(+) | 0.78 | |
hsa-mir-337|chr14:101340851-101340913(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.77 | |
hsa-mir-539|chr14:101513665-101513731(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.75 | |
hsa-mir-487a|chr14:101518794-101518854(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.85 | |
hsa-mir-656|chr14:101533046-101533125(+) | hsa-mir-3199-1|chr22:28316522-28316598(-) | 0.70 | |
hsa-mir-154|chr14:101526104-101526165(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.78 | |
hsa-mir-3157|chr10:97824076-97824148(-) | hsa-mir-548f-1|chr10:56367635-56367706(-) | 0.78 | |
5S_rRNA-related|chr10:98379147-98379205(+) | ame-mir-9b|Group15.33:20342-20400(-) | 0.76 | |
hsa-mir-9-2|chr5:87962681-87962743(-) | mmu-mir-3067|chr12:81166165-81166225(+) | 0.75 | |
hsa-mir-655|chr14:101515908-101515970(+) | mmu-mir-3088|chr2:28733286-28733345(+) | 0.78 | |
hsa-mir-1185-1|chr14:101509327-101509389(+) | mmu-mir-3105|chr7:144009267-144009327(+) | 0.77 | |
U6-related|chr5:85958973-85959030(-) | mmu-mir-5617|chrX:20863126-20863182(-) | 0.74 | |
hsa-mir-136|chr14:101351050-101351112(+) | hsa-mir-642a|chr19:46178198-46178260(+) | 0.70 | |
hsa-mir-382|chr14:101520651-101520712(+) | hsa-mir-513c|chrX:146271232-146271293(-) | 0.72 | |
hsa-mir-412|chr14:101531800-101531858(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.75 | |
hsa-mir-380|chr14:101491356-101491414(+) | hsa-mir-676|chrX:69242714-69242771(+) | 0.81 | |
hsa-mir-1307|chr10:105154054-105154118(-) | bfl-mir-34c-1|Bf_V2_269:1088514-1088576(-) | 0.75 | |
hsa-mir-3922|chr12:104985422-104985484(+) | cel-mir-254|X:11333485-11333547(-) | 0.78 | |
hsa-mir-1251|chr12:97885670-97885710(+) | cbr-mir-87|chrV:6389737-6389778(+) | 0.73 | |
hsa-mir-541|chr14:101530840-101530906(+) | crm-mir-46|Crem_Contig12:1283924-1283990(-) | 0.75 | |
hsa-mir-1304|chr11:93466855-93466914(-) | hsa-mir-526b|chr19:54197660-54197720(+) | 0.77 | |
hsa-mir-431|chr14:101347362-101347428(+) | hsa-mir-493|chr14:101335411-101335476(+) | 0.77 | |
hsa-mir-376a-1|chr14:101507124-101507184(+) | hsa-mir-370|chr14:101377488-101377547(+) | 0.85 | |
hsa-mir-7-1|chr9:86584684-86584751(-) | crm-mir-58a|Crem_Contig6993:66-133(+) | 0.71 | |
hsa-mir-544|chr14:101515010-101515071(+) | hsa-mir-154|chr14:101526103-101526164(+) | 0.81 | |
hsa-mir-432|chr14:101350832-101350902(+) | cqu-mir-9|supercont3.83:64733-64802(+) | 0.78 | |
hsa-mir-370|chr14:101377485-101377547(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.72 | |
hsa-mir-3170|chr13:98860774-98860808(+) | osa-MIR1428b|chr01:25389379-25389410(+) | 0.88 | |
hsa-mir-107|chr10:91352511-91352573(-) | hsa-mir-519a-1|chr19:54255662-54255724(+) | 0.78 | |
hsa-mir-1287|chr10:100154986-100155049(-) | cbr-mir-51|chrIV:5734749-5734809(+) | 0.78 | |
hsa-mir-2277|chr5:92956412-92956477(-) | mmu-mir-3070a|chr12:109587958-109588022(+) | 0.76 | |
hsa-mir-9-3|chr15:89911260-89911325(+) | cel-mir-791|X:5809325-5809389(+) | 0.75 | |
hsa-mir-1255a|chr4:102251481-102251544(-) | cel-mir-355|II:11833495-11833556(-) | 0.80 | |
hsa-mir-379|chr14:101488406-101488467(+) | cbr-mir-46|chrIII:7878510-7878572(+) | 0.80 | |
hsa-mir-302a|chr4:113569340-113569401(-) | bmo-mir-9a|nscaf2527:9289-9351(-) | 0.73 | |
hsa-mir-455|chr9:116971727-116971789(+) | mmu-mir-3076|chr14:30572149-30572208(+) | 0.72 | |
hsa-mir-34b|chr11:111383674-111383734(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.84 | |
hsa-mir-30b|chr8:135812772-135812835(-) | cqu-mir-1175|supercont3.86:866115-866178(+) | 0.81 | |
hsa-mir-505|chrX:139006316-139006399(-) | osa-MIR5538|chr10:21265771-21265854(+) | 0.77 | |
hsa-mir-3144|chr6:120336335-120336393(+) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.90 | |
hY1_RNA-related|chr5:131803874-131803943(+) | crm-mir-58a|Crem_Contig6993:66-133(+) | 0.71 | |
IRES_c-myc_RF00216|chr8:128748443-128748498(+) | hsa-mir-676|chrX:69242714-69242771(+) | 0.77 | |
hsa-mir-3657|chr12:112475428-112475488(-) | mmu-mir-1b|chr18:10785486-10785548(+) | 0.79 | |
hsa-mir-548d-1|chr8:124360288-124360325(-) | ppt-MIR1051|scaffold_56:1824653-1824690(+) | 0.76 | |
hsa-mir-942|chr1:117637275-117637340(+) | hsa-mir-500b|chrX:49775286-49775351(+) | 0.78 | |
hsa-mir-1264|chrX:113887129-113887194(+) | cel-mir-49|X:9989244-9989306(+) | 0.81 | |
hsa-mir-32|chr9:111808509-111808574(-) | tca-mir-3811e|chrLG1:8499630-8499695(+) | 0.72 | |
hsa-mir-1243|chr4:114027985-114028045(+) | hsa-mir-519b|chr19:54198478-54198538(+) | 0.79 | |
hsa-mir-548e|chr10:112748695-112748757(+) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.78 | |
hsa-mir-125b-1|chr11:121970516-121970556(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.74 | |
hsa-mir-199b|chr9:131007021-131007086(-) | cel-mir-791|X:5809325-5809389(+) | 0.73 | |
hsa-mir-576|chr4:110409868-110409931(+) | cqu-mir-1175|supercont3.86:866115-866178(+) | 0.80 | |
hsa-mir-100|chr11:122022946-122023005(-) | mmu-mir-190b|chr3:90070030-90070090(+) | 0.77 | |
18S_rRNA-related|chr2:133013386-133013474(-) | osa-MIR2864|chr12:25631128-25631216(-) | 0.70 | |
hsa-mir-1277|chrX:117520365-117520425(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.79 | |
chr3_Glu_CTC|chr3:125413172-125413241(-) | cbr-mir-2225|chrII:1875319-1875386(+) | 0.74 | |
hsa-mir-335|chr7:130135965-130136025(+) | hsa-mir-519b|chr19:54198478-54198538(+) | 0.74 | |
hsa-mir-490|chr7:136587950-136588013(+) | mmu-mir-5615-1|chr10:81104614-81104673(-) | 0.74 | |
hsa-mir-96|chr7:129414536-129414602(-) | mmu-mir-216a|chr11:28757016-28757080(+) | 0.75 | |
hsa-mir-600|chr9:125873837-125873899(-) | hsa-mir-6503|chr11:59976557-59976619(-) | 0.80 | |
hsa-mir-30d|chr8:135817119-135817184(-) | mmu-mir-3108|chr8:108936867-108936931(+) | 0.75 | |
hsa-mir-652|chrX:109298574-109298640(+) | hsa-mir-3200|chr22:31127553-31127621(+) | 0.73 | |
hsa-mir-29b-1|chr7:130562223-130562290(-) | hsa-mir-3200|chr22:31127553-31127621(+) | 0.73 | |
hsa-mir-592|chr7:126698164-126698224(-) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.86 | |
hsa-mir-181b-2|chr9:127456001-127456062(+) | hsa-mir-154|chr14:101526103-101526164(+) | 0.70 | |
hsa-mir-551b|chr3:168269662-168269722(+) | cel-mir-4812|X:15242711-15242770(-) | 0.86 | |
hsa-mir-145|chr5:148810222-148810287(+) | mmu-mir-3070a|chr12:109587958-109588022(+) | 0.74 | |
hsa-mir-151|chr8:141742682-141742744(-) | hsa-mir-642a|chr19:46178198-46178260(+) | 0.77 | |
hsa-mir-767|chrX:151561917-151561976(-) | osa-MIR395v|chr09:6605582-6605641(-) | 0.76 | |
hsa-mir-199a-2|chr1:172113691-172113756(-) | hsa-mir-200a|chr1:1103255-1103319(+) | 0.73 | |
hsa-mir-153-2|chr7:157367037-157367101(-) | tca-mir-3851c|chrLG6:12644179-12644243(+) | 0.78 | |
chr1_Asp_GTC|chr1:161574597-161574659(+) | hsa-mir-3123|chr1:241295577-241295636(+) | 0.74 | |
hsa-mir-190b|chr1:154166130-154166209(-) | ppt-MIR1034|scaffold_202:211339-211420(-) | 0.78 | |
hsa-mir-105-1|chrX:151560699-151560760(-) | hsa-mir-190a|chr15:63116167-63116228(+) | 0.74 | |
hsa-mir-3919|chr3:159000447-159000512(+) | osa-MIR398b|chr07:14597636-14597701(-) | 0.78 | |
hsa-mir-105-2|chrX:151562892-151562953(-) | hsa-mir-190a|chr15:63116167-63116228(+) | 0.74 | |
mir-548_RF01061|chr5:150512463-150512505(-) | cre-MIR912|scaffold_35:929979-930022(-) | 0.83 | |
hsa-mir-585|chr5:168690616-168690674(-) | tca-mir-3840|chrLG3:19008293-19008351(+) | 0.74 | |
hsa-mir-378|chr5:149112390-149112453(+) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.76 | |
hsa-mir-556|chr1:162312348-162312412(+) | cbr-mir-46|chrIII:7878510-7878572(+) | 0.77 | |
hsa-mir-224|chrX:151127055-151127124(-) | dme-mir-973|X:19445577-19445647(+) | 0.72 | |
hsa-mir-10b|chr2:177015056-177015117(+) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.83 | |
hsa-mir-3939|chr6:167411319-167411376(-) | cel-mir-794|I:12595694-12595752(+) | 0.89 | |
hsa-mir-452|chrX:151128108-151128172(-) | hsa-mir-34b|chr11:111383673-111383736(+) | 0.70 | |
chr7_Cys_GCA|chr7:149344030-149344087(-) | osa-MIR171h|chr04:28297325-28297382(+) | 0.71 | |
hsa-mir-671|chr7:150935534-150935596(+) | hsa-mir-379|chr14:101488405-101488467(+) | 0.72 | |
hsa-mir-1294|chr5:153726710-153726772(+) | cqu-mir-10|supercont3.12:95999-96062(-) | 0.79 | |
tRNA_RF00005|chr1:161492944-161493002(+) | mmu-mir-5626|chr9:70405694-70405753(-) | 0.76 | |
hsa-mir-3692|chr6:157950168-157950229(+) | hsa-mir-518d|chr19:54238144-54238204(+) | 0.82 | |
hsa-mir-3912|chr5:170813677-170813740(-) | cel-mir-259|V:10539018-10539082(-) | 0.73 | |
hsa-mir-2114|chrX:149396251-149396308(+) | hsa-mir-676|chrX:69242714-69242771(+) | 0.91 | |
hsa-mir-937|chr8:144895140-144895199(-) | hsa-mir-624|chr14:31483864-31483925(-) | 0.81 | |
hsa-mir-9-1|chr1:156390143-156390207(-) | hsa-mir-493|chr14:101335411-101335476(+) | 0.75 | |
hsa-mir-561|chr2:189162242-189162301(+) | ppc-mir-2274|Ppa_Contig180:297859-297920(+) | 0.79 | |
hsa-mir-153-1|chr2:220158845-220158907(-) | hsa-mir-3189|chr19:18497380-18497441(+) | 0.84 | |
hsa-mir-3129|chr2:189997765-189997828(-) | osa-MIR395v|chr09:6605582-6605641(-) | 0.76 | |
hY4_RNA-related|chr2:201727865-201727956(-) | hsa-mir-1294|chr5:153726710-153726803(+) | 0.73 | |
hsa-mir-181b-1|chr1:198828015-198828078(-) | mmu-mir-3075|chr14:25534451-25534513(+) | 0.71 | |
hsa-mir-1245|chr2:189842819-189842884(+) | hsa-mir-585|chr5:168690626-168690689(-) | 0.77 | |
hsa-mir-135b|chr1:205417448-205417511(-) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.79 | |
hsa-mir-181a-1|chr1:198828196-198828260(-) | mmu-mir-329|chr12:109713502-109713565(+) | 0.73 | |
hsa-mir-28|chr3:188406579-188406645(+) | cel-mir-791|X:5809325-5809389(+) | 0.75 | |
hsa-mir-570|chr3:195426293-195426353(+) | hsa-mir-3189|chr19:18497380-18497441(+) | 0.75 | |
hsa-mir-1537|chr1:236016297-236016356(-) | hsa-mir-548ak|chr10:12172759-12172815(-) | 0.75 | |
hsa-mir-1305|chr4:183090457-183090518(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.81 | |
hsa-mir-205|chr1:209605510-209605570(+) | cbr-mir-51|chrIV:5734749-5734809(+) | 0.81 | |
hsa-mir-1278|chr1:193105642-193105703(+) | cel-mir-785|X:3004677-3004737(+) | 0.82 | |
hsa-mir-33b|chr17:17717170-17717230(-) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.79 | |
hsa-mir-320a|chr8:22102485-22102532(-) | osa-MIR5536|chr09:9139162-9139210(-) | 0.77 | |
hsa-mir-1301|chr2:25551518-25551580(-) | hsa-mir-6503|chr11:59976557-59976619(-) | 0.77 | |
chr14_Thr_TGT|chr14:21099297-21099359(-) | cel-mir-355|II:11833495-11833556(-) | 0.71 | |
hsa-mir-491|chr9:20716117-20716175(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.81 | |
hsa-mir-1915|chr10:21785500-21785560(-) | hsa-mir-519b|chr19:54198478-54198538(+) | 0.83 | |
5S_rRNA-related|chr10:19922599-19922631(-) | bmo-mir-2851-2|nscaf2176:345088-345121(+) | 0.74 | |
28S_rRNA-related|chr19:24183068-24183099(-) | osa-MIR1857|chr11:2729893-2729925(+) | 0.72 | |
hsa-mir-548v|chr8:17539095-17539155(-) | hsa-mir-513c|chrX:146271232-146271293(-) | 0.80 | |
chr9_Met_CAT|chr9:19404030-19404072(+) | ppt-MIR1030f|scaffold_435:112787-112823(-) | 0.74 | |
hsa-mir-130b|chr22:22007594-22007666(+) | spu-mir-153|gb | 0.81 | |
hsa-mir-125b-2|chr21:17962572-17962635(+) | mmu-mir-3105|chr7:144009267-144009327(+) | 0.76 | |
hsa-mir-1306|chr22:20073594-20073655(+) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.84 | |
hsa-mir-3189|chr19:18497379-18497439(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.77 | |
hsa-mir-99a|chr21:17911418-17911480(+) | mmu-mir-879|chr5:9375712-9375772(+) | 0.74 |
Listed below are the profile alignment results for 523 ncRNA from ENCODE dataset (query) with miRNA from miRRPdb (subject)
Query | Subject | Score | Alignment |
n-a|chr3:12705808-12705865(+) | hsa-mir-885|chr3:10436178-10436236(-) | 0.81 | |
n-a|chr9:14441124-14441179(+) | tca-mir-3871|chrLG7:2957140-2957194(+) | 0.72 | |
n-a|chr19:2082497-2082527(-) | osa-MIR167a|chr12:25443302-25443332(+) | 0.74 | |
n-a|chr19:13251906-13251958(+) | ath-MIR5995b|chr2:10026962-10027034(+) | 0.73 | |
n-a|chr12:12874013-12874094(+) | ath-MIR5648|chr1:11499446-11499563(+) | 0.71 | |
n-a|chr2:5832515-5832581(+) | bfl-mir-124|Bf_V2_32:1879934-1879995(+) | 0.73 | |
n-a|chr7:6063417-6063466(+) | osa-MIR5536|chr09:9139162-9139210(-) | 0.73 | |
n-a|chr12:12957718-12957764(+) | ath-MIR4240|chr4:10711712-10711759(-) | 0.73 | |
n-a|chr18:12326145-12326180(+) | bmo-mir-2775b|nscaf2883:1275550-1275585(-) | 0.77 | |
n-a|chr19:1136007-1136073(+) | bmo-mir-3204b|nscaf1690:5500376-5500441(+) | 0.75 | |
n-a|chr9:5093212-5093270(+) | crm-mir-246-1|Crem_Contig1306:7321-7380(-) | 0.70 | |
n-a|chr3:5058313-5058386(-) | spu-mir-2006|gb | 0.76 | |
n-a|chrX:12996176-12996244(+) | tca-mir-3856|chrLG6:4494303-4494364(+) | 0.72 | |
n-a|chr19:14126499-14126571(+) | tca-mir-3835|chrLG2:3085142-3085211(+) | 0.70 | |
n-a|chr20:5986767-5986825(+) | hsa-mir-4766|chr22:41209895-41209955(-) | 0.76 | |
n-a|chr18:8891639-8891689(+) | bmo-mir-2788|nscaf2829:2326311-2326365(-) | 0.72 | |
n-a|chr19:811542-811568(+) | hsa-mir-3610|chr8:117887000-117887027(-) | 0.84 | |
n-a|chr4:7059851-7059880(-) | ath-MIR1886|chr2:15611873-15611902(+) | 0.74 | |
n-a|chr8:6602696-6602755(+) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.79 | |
RNAz Sequence GCUGCCAUGUCUAAGAAGAAAACUUUGGAGAAAAAUUUUCUUCUUAGACAUGGCAACGU RNAz Consensus SS ..((((((((((((((((((((.(((.....))).)))))))))))))))))))).... CMfinder Sequence CUGCCAUGUCUAAGAAGAAAACUUUGGAGAAAAAUUUUCUUCUUAG CMfinder Consensus SS :::::::::<<<<<<<<<<<<-<<<_____>>>->>>>>>>>>>>> | |||
n-a|chr10:5729069-5729135(+) | hsa-mir-642a|chr19:46178198-46178260(+) | 0.71 | |
n-a|chr20:10400309-10400367(-) | hsa-mir-518f|chr19:54203282-54203342(+) | 0.73 | |
n-a|chr11:2965667-2965714(-) | ame-mir-3734|Group6.21:301078-301126(+) | 0.73 | |
n-a|chr19:4445983-4446040(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.84 | |
n-a|chr19:5661691-5661754(+) | bmo-mir-3204b|nscaf1690:5500376-5500441(+) | 0.75 | |
n-a|chr5:9053934-9053998(-) | ppc-mir-240|Ppa_Contig140:224093-224156(-) | 0.79 | |
n-a|chr18:3885359-3885423(-) | hsa-mir-516a-2|chr19:54264399-54264464(+) | 0.78 | |
RNAz Sequence CCCUAGUGGCCAGAGGGCUUAUGAUAUAUUGUGAGAGACAUGUCAUAAGCCCUUUGGCCACUAG RNAz Consensus SS ((((.........))))............................................... CMfinder Sequence GUGGUCAGAGGGCUUAUGAUAUAUUGUGAGAGCCAUGUCAUAAGCCUUUUGGCCAC CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<<<<---<<____>>->>>>>>>>>>>>>>>>>>>>>> | |||
n-a|chr16:3201200-3201248(+) | tca-mir-3890|chrLG3:21939384-21939436(-) | 0.74 | |
n-a|chr10:5136574-5136634(+) | hsa-mir-301b|chr22:22007279-22007339(+) | 0.71 | |
n-a|chr10:3133228-3133281(-) | hsa-mir-885|chr3:10436178-10436236(-) | 0.71 | |
n-a|chr4:1005437-1005473(-) | osa-MIR2877|chr04:28400265-28400301(-) | 0.72 | |
n-a|chr1:8319738-8319817(-) | osa-MIR156f|chr08:21475623-21475702(+) | 0.72 | |
n-a|chr10:1450979-1451040(-) | ppc-mir-2233|Ppa_Contig180:297988-298048(+) | 0.84 | |
n-a|chr19:11646908-11646974(-) | hsa-mir-516a-2|chr19:54264399-54264464(+) | 0.81 | |
n-a|chr19:8509666-8509698(-) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.73 | |
n-a|chr12:6611373-6611430(+) | ame-mir-9b|Group15.33:20342-20400(-) | 0.83 | |
n-a|chr20:6168461-6168497(-) | ame-mir-3763|GroupUn.1127:12726-12763(+) | 0.73 | |
n-a|chr10:8094668-8094737(-) | bmo-mir-3204b|nscaf1690:5500376-5500441(+) | 0.71 | |
n-a|chr5:5396443-5396500(+) | tca-mir-3871|chrLG7:2957140-2957194(+) | 0.77 | |
n-a|chr18:5085875-5085920(-) | cre-MIR912|scaffold_35:929979-930022(-) | 0.78 | |
n-a|chr10:494442-494514(+) | ath-MIR2939|chr5:19566986-19567060(+) | 0.71 | |
n-a|chr19:10212889-10212953(+) | cbr-mir-64a|chrIII:218927-218991(-) | 0.80 | |
n-a|chr11:6633559-6633629(+) | cel-mir-1020|III:10047655-10047724(-) | 0.76 | |
n-a|chr11:238025-238110(+) | ppt-MIR1034|scaffold_202:211339-211420(-) | 0.71 | |
n-a|chr19:13263866-13263923(+) | ame-mir-3731|Group5.13:407605-407690(+) | 0.78 | |
n-a|chr1:8085363-8085434(+) | osa-MIR399b|chr02:7664038-7664112(-) | 0.78 | |
n-a|chr5:14208891-14208947(+) | mmu-mir-3091|chr2:180257545-180257601(+) | 0.75 | |
n-a|chr16:2029430-2029484(-) | bfl-mir-33-1|Bf_V2_21:4947537-4947596(-) | 0.71 | |
n-a|chr19:8454188-8454245(-) | osa-MIR5514|chr02:22834339-22834382(+) | 0.82 | |
n-a|chr11:606377-606441(+) | tca-mir-3811c-2|chrLG1:8498728-8498793(+) | 0.80 | |
n-a|chr16:4612575-4612640(-) | mmu-mir-344i|chr7:62085233-62085298(-) | 0.79 | |
n-a|chr19:6172500-6172567(+) | osa-MIR5075|chr11:7874360-7874425(-) | 0.74 | |
n-a|chr11:2151976-2152045(-) | cbr-mir-85|chrII:3615939-3616004(-) | 0.73 | |
n-a|chr17:4458251-4458311(-) | hsa-mir-2116|chr15:59463392-59463452(-) | 0.81 | |
n-a|chr11:10326619-10326664(+) | bmo-mir-2841|nscaf2828:3962841-3962887(-) | 0.74 | |
n-a|chr16:3183071-3183098(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.71 | |
n-a|chr10:4926782-4926850(+) | cbr-mir-44|chrII:8049280-8049348(-) | 0.80 | |
RNAz Sequence AAACUUAUGAAAAGUGACUGUUUUUAAAAGACUAGUCUGAAUCCAAACAGUCCCUUUU_AUAAGUUUGG RNAz Consensus SS ((((((((.(((((.((((((((.....(((....)))......)))))))).))))).)))))))).. CMfinder Sequence AAACUUAUGAAAAGUGACUGUUUUUAAAAGACUAGUCUGAAUCCAAACAGUCCCUUUUAUAAGUUU CMfinder Consensus SS :<<<<<<<<<<----<<<<<<<<-----<<<____>>>------>>>>>>>>--->>>>>>>>>>: | |||
n-a|chr9:3507951-3508000(+) | cre-MIR905|scaffold_75:370868-370928(+) | 0.78 | |
n-a|chr20:5749477-5749513(-) | hsa-mir-647|chr20:62574022-62574057(-) | 0.71 | |
n-a|chr17:8744436-8744465(-) | tca-mir-3903|chrLG1:10618057-10618085(+) | 0.77 | |
n-a|chr17:30819042-30819104(-) | tca-mir-3842|chrLG3:559289-559350(+) | 0.73 | |
n-a|chr21:28290707-28290791(-) | hsa-mir-4742|chr1:224585929-224586013(-) | 0.72 | |
n-a|chr15:33023430-33023485(+) | hsa-mir-494|chr14:101495985-101496042(+) | 0.72 | |
n-a|chr6:27805298-27805348(+) | mmu-mir-5618|chr9:7784390-7784440(+) | 0.74 | |
n-a|chr9:35056625-35056685(-) | hsa-mir-885|chr3:10436178-10436236(-) | 0.78 | |
n-a|chr6:36937723-36937751(-) | osa-MIR439j|chr10:15738026-15738054(-) | 0.81 | |
n-a|chr8:30927617-30927662(+) | ath-MIR5656|chr1:1727361-1727408(+) | 0.72 | |
n-a|chr1:27108555-27108593(+) | hsa-mir-4654|chr1:162126906-162126944(+) | 0.76 | |
n-a|chr21:30375162-30375208(+) | hsa-mir-3917|chr1:26232904-26232945(-) | 0.71 | |
n-a|chr9:29035559-29035621(-) | cel-mir-785|X:3004677-3004737(+) | 0.77 | |
n-a|chr20:37145233-37145270(+) | ppt-MIR1030f|scaffold_435:112787-112823(-) | 0.76 | |
n-a|chr15:33036882-33036938(+) | nve-mir-2027|scaffold_241:295192-295245(+) | 0.76 | |
RNAz Sequence ACAUUGUACAGAUGCAGGAUAACAAUGCAGUGUUAUCCUGCAUCUGUACAAUCAA RNAz Consensus SS ..((((((((((((((((((((((......))))))))))))))))))))))... CMfinder Sequence GUACAGAUGCAGGAUAACAAUGCAGUGUUAU CMfinder Consensus SS ::<<<--<<<<_________>>>>->>>::: | |||
n-a|chr10:31608140-31608189(+) | hsa-mir-1248|chr3:186504461-186504508(+) | 0.72 | |
n-a|chr6:35995542-35995606(+) | osa-MIR5525|chr09:3903322-3903385(-) | 0.74 | |
n-a|chr22:34199997-34200056(-) | hsa-mir-676|chrX:69242714-69242771(+) | 0.75 | |
n-a|chr14:35162612-35162660(+) | mmu-mir-374c|chrX:103573085-103573133(+) | 0.72 | |
n-a|chr22:30403040-30403102(+) | hsa-mir-6503|chr11:59976557-59976619(-) | 0.79 | |
n-a|chrX:28036700-28036760(+) | ppc-mir-2274|Ppa_Contig180:297859-297920(+) | 0.84 | |
RNAz Sequence AUAUC___CUUUUCUAGGGCUGAAUA_______ACCAUAUGAAUAU___UAUUCAGCCUUAAAAAAGGAUACU RNAz Consensus SS ........(((((.((((((((((((.......................)))))))))))).)))))...... CMfinder Sequence UAUCCUUUUCUAGGGCUGAACAACCAUAUGAAUAUUAUUCAGACUUAAAAAAGGAUA CMfinder Consensus SS :<<<<<<<<-<<<<<<<<<<_________________>>>>>>>>>>->>>>>>>>: | |||
n-a|chr19:34664115-34664184(-) | mmu-mir-5623|chr19:58051167-58051236(+) | 0.70 | |
n-a|chr5:36606718-36606779(+) | hsa-mir-664b|chrX:153996871-153996931(+) | 0.82 | |
n-a|chr9:34329578-34329648(+) | osa-MIR395s|chr04:32437845-32437915(+) | 0.72 | |
n-a|chr1:28908344-28908384(-) | hsa-mir-3184|chr17:28444113-28444149(-) | 0.71 | |
n-a|chr21:34852498-34852540(+) | cbr-mir-87|chrV:6389737-6389778(+) | 0.72 | |
n-a|chr6:28555569-28555617(-) | osa-MIR5536|chr09:9139162-9139210(-) | 0.80 | |
RNAz Sequence GCCU_______________CAGUUGUU________UAGUCACGGAGCACAGAGCCGUGAC__UAAACAACUGU_ RNAz Consensus SS .....................................(((.(((.........))).))).............. CMfinder Sequence NA CMfinder Consensus SS NA | |||
n-a|chr7:27022991-27023022(-) | osa-MIR167a|chr12:25443302-25443332(+) | 0.80 | |
n-a|chr20:34635266-34635341(-) | osa-MIR5161|chr12:12081119-12081163(+) | 0.70 | |
n-a|chr13:31039644-31039683(-) | hsa-mir-3917|chr1:26232904-26232945(-) | 0.76 | |
n-a|chr3:34057485-34057525(+) | ath-MIR779|chr2:9560866-9560907(+) | 0.81 | |
n-a|chr6:30011698-30011724(-) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.76 | |
n-a|chr7:32027148-32027193(+) | ath-MIR4240|chr4:10711712-10711759(-) | 0.76 | |
n-a|chr1:27237983-27238011(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.80 | |
n-a|chr17:27919475-27919531(+) | tca-mir-3840|chrLG3:19008293-19008351(+) | 0.78 | |
n-a|chr2:36662751-36662811(+) | hsa-mir-520c|chr19:54210722-54210782(+) | 0.77 | |
RNAz Sequence CAAAAGUAAUCGCAGUUUUUGUCAUUACUUUCACUGGCAAAAAC_GC_AUUGCUUUUGCA RNAz Consensus SS ((((((((((.((.((.((((((............)))))).)).)).)))))))))).. CMfinder Sequence CAAAAGUAAUCGCAGUUUUUGUCAUUACUUUCAAUGGCAAAAACAGCGAUUGCUUUUG CMfinder Consensus SS <<<<<<<<<<<<<-<<<<<<<<<<<<______>>>>>>>>>>>>->>>>>>>>>>>>> | |||
n-a|chr21:28208606-28208691(-) | osa-MIR156f|chr08:21475623-21475702(+) | 0.72 | |
n-a|chr19:35820103-35820133(+) | osa-MIR439j|chr10:15738111-15738142(-) | 0.74 | |
n-a|chr14:34034242-34034274(+) | hsa-mir-3610|chr8:117887000-117887027(-) | 0.76 | |
n-a|chr16:30645869-30645900(+) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.76 | |
n-a|chr6:32938490-32938544(-) | tca-mir-3871|chrLG7:2957140-2957194(+) | 0.81 | |
n-a|chr21:35898994-35899122(-) | hsa-mir-548y|chr14:48230208-48230278(-) | 0.71 | |
n-a|chr20:36151972-36152007(-) | bmo-mir-2851-2|nscaf2176:345088-345121(+) | 0.72 | |
n-a|chr8:33371274-33371333(+) | hsa-mir-548ak|chr10:12172759-12172815(-) | 0.75 | |
n-a|chr13:36919793-36919852(+) | hsa-mir-491|chr9:20716116-20716174(+) | 0.74 | |
n-a|chr13:27259474-27259536(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.79 | |
RNAz Sequence NA RNAz Consensus SS NA CMfinder Sequence UAGCCACUAGCCACAUGUCAGUUCAUGCUUUUAAGGCUAUAUGUGCCUAGUGGCUGCUG CMfinder Consensus SS <<<<<<<<<<-<<<<<<<-<<<<___________>>>>>>>>>>>->>>>>>>>>>::: | |||
n-a|chr6:35632500-35632558(-) | hsa-mir-518d|chr19:54238144-54238204(+) | 0.76 | |
RNAz Sequence UUUCAACUACUACCUCUAUUAGUAUAACUCCCAAAUCCUAAUAGAGGUAGUAGCUGAA RNAz Consensus SS ..(((.((((((.((((((.....................)))))).)))))).))). CMfinder Sequence UCAACUAUUACCUCUAUUAGUAUAACUCCCAAAUCCUAAUAGAGGUAGUAGCUGA CMfinder Consensus SS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: | |||
n-a|chr17:28088320-28088359(-) | bmo-mir-2808b|nscaf2964:1385681-1385711(+) | 0.71 | |
n-a|chr19:37019096-37019140(-) | osa-MIR167c|chr03:33123590-33123633(+) | 0.72 | |
n-a|chr14:32545969-32546029(-) | hsa-mir-624|chr14:31483864-31483925(-) | 0.82 | |
n-a|chr6:28849690-28849740(+) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.78 | |
n-a|chr13:30969815-30969879(+) | osa-MIR1879|chr10:5651860-5651927(+) | 0.71 | |
n-a|chr21:28168655-28168694(+) | bmo-mir-2855|nscaf2912:142836-142872(-) | 0.74 | |
n-a|chr20:34309769-34309828(-) | hsa-mir-369|chr14:101531939-101532000(+) | 0.73 | |
n-a|chr1:27998666-27998703(-) | cqu-mir-133|supercont3.1189:55748-55784(+) | 0.77 | |
n-a|chr16:30418893-30418976(+) | ppt-MIR1023e|scaffold_51:960517-960596(+) | 0.76 | |
n-a|chr19:37569063-37569100(-) | ath-MIR779|chr2:9560866-9560907(+) | 0.71 | |
n-a|chr7:44112974-44113027(-) | hsa-mir-548ak|chr10:12172759-12172815(-) | 0.78 | |
n-a|chr8:40030371-40030493(-) | bmo-mir-3384|nscaf1690:1480845-1480966(-) | 0.70 | |
n-a|chr15:45480123-45480165(-) | hsa-mir-3184|chr17:28444113-28444149(-) | 0.70 | |
n-a|chr17:44272059-44272102(-) | osa-MIR5146|chr01:22417283-22417329(+) | 0.74 | |
n-a|chr4:40504065-40504124(-) | mmu-mir-3067|chr12:81166165-81166225(+) | 0.79 | |
n-a|chr3:48672816-48672892(-) | hsa-mir-548y|chr14:48230208-48230278(-) | 0.71 | |
n-a|chr19:44669257-44669296(+) | osa-MIR395l|chr08:3299060-3299093(+) | 0.71 | |
n-a|chr8:48846117-48846179(-) | cbr-mir-51|chrIV:5734749-5734809(+) | 0.81 | |
n-a|chr12:46753697-46753781(-) | osa-MIR1877|chr09:21043496-21043539(+) | 0.73 | |
n-a|chr20:44992967-44993029(-) | osa-MIR395r|chr04:32437703-32437768(+) | 0.78 | |
n-a|chr22:37880522-37880596(-) | hsa-mir-431|chr14:101347359-101347426(+) | 0.71 | |
n-a|chr13:41342495-41342547(-) | nve-mir-2027|scaffold_241:295192-295245(+) | 0.77 | |
n-a|chr15:39880876-39880901(+) | osa-MIR5162|chr12:16418640-16418668(+) | 0.72 | |
n-a|chr17:40575239-40575274(-) | osa-MIR1428b|chr01:25389379-25389410(+) | 0.75 | |
n-a|chr5:39074428-39074495(-) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.73 | |
n-a|chr17:39684513-39684560(-) | hsa-mir-1248|chr3:186504461-186504508(+) | 0.71 | |
n-a|chr6:42296819-42296849(-) | osa-MIR1428f|chr07:5450399-5450430(-) | 0.84 | |
n-a|chr20:47630203-47630231(+) | osa-MIR1428b|chr01:25389379-25389410(+) | 0.80 | |
n-a|chr15:44828807-44828875(-) | osa-MIR319b|chr01:6676582-6676646(-) | 0.77 | |
n-a|chr17:41150465-41150516(+) | hsa-mir-374c|chrX:73438391-73438443(+) | 0.72 | |
n-a|chr11:47606076-47606109(+) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.71 | |
n-a|chr10:47008395-47008445(+) | ame-mir-3734|Group6.21:301078-301126(+) | 0.71 | |
n-a|chr22:43820948-43820975(-) | osa-MIR2872|chr11:2520915-2520944(+) | 0.73 | |
n-a|chr6:44214837-44214895(+) | hsa-mir-137|chr1:98511648-98511707(-) | 0.73 | |
n-a|chr7:45026189-45026221(-) | osa-MIR164e|chr03:10541166-10541196(+) | 0.76 | |
n-a|chrX:48814431-48814508(-) | hsa-mir-548al|chr11:74110291-74110367(+) | 0.82 | |
n-a|chr4:47709037-47709144(+) | hsa-mir-518c|chr19:54211992-54212072(+) | 0.71 | |
n-a|chr2:43453664-43453743(-) | ppt-MIR1055|scaffold_391:252837-252876(-) | 0.74 | |
n-a|chr22:46156409-46156474(+) | hsa-mir-516a-2|chr19:54264399-54264464(+) | 0.78 | |
n-a|chr1:44514151-44514210(+) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.76 | |
n-a|chr19:38534244-38534304(+) | tca-mir-3856|chrLG6:4494303-4494364(+) | 0.75 | |
n-a|chr21:44808624-44808757(-) | osa-MIR5080|chr10:2321004-2321074(-) | 0.72 | |
n-a|chr19:42460219-42460278(+) | mmu-mir-5127|chr18:81992012-81992072(-) | 0.75 | |
n-a|chr19:50083759-50083813(-) | hsa-mir-676|chrX:69242714-69242771(+) | 0.75 | |
n-a|chrX:41916257-41916307(-) | mmu-mir-5618|chr9:7784390-7784440(+) | 0.73 | |
n-a|chrX:41840981-41841013(-) | hsa-mir-647|chr20:62574022-62574057(-) | 0.77 | |
n-a|chr20:49370222-49370274(+) | osa-MIR5536|chr09:9139162-9139210(-) | 0.76 | |
n-a|chr11:46666077-46666124(+) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.74 | |
n-a|chrX:47695976-47696097(-) | hsa-mir-548ac|chr1:117102649-117102719(-) | 0.71 | |
n-a|chr1:44066138-44066197(+) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.88 | |
RNAz Sequence CUUGGGACUGGGUCAUUCUGUUCCUCGCCAGUGGGAGAGCAGAUGGGGC_CUGGUCCCGAG RNAz Consensus SS (((.((((..((((...((((((((((....)))).))))))....))).)..)))).))) CMfinder Sequence CUCAGGACUGGGUCAUUCUGUUCCUCGCCAGUGGGAGAGCAG-UGGGGCCUGGUCCC CMfinder Consensus SS ::::<<<<--<<<<---<<<<<<<<<<____>>>>->>>>>>---->>>>-->>>>: | |||
n-a|chr19:50456304-50456333(-) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.78 | |
n-a|chr10:50035524-50035593(+) | ath-MIR5024|chr1:16766279-16766341(-) | 0.83 | |
RNAz Sequence A_UGACACAGAGAGAGAGAC_G_AAGUAUGUUCACUUUC__UGUCUCUCUCUCUCUGUGUCAGUGUGCAUG RNAz Consensus SS ...........................((((.((((.........................)))).)))). CMfinder Sequence ACUGACACAGAGAGAGAGACAGGAAUUAUGUUCACUUUCUGUCUCUCUCUCUCCGUGUCAGU CMfinder Consensus SS :<<<<<<<<<<<<<<<<<<<<<<<<<<______>>>>>>>>>>>>>>>>>>>-->>>>>>>: | |||
n-a|chr19:39589840-39589874(+) | osa-MIR171i|chr03:21190120-21190156(+) | 0.72 | |
n-a|chr22:46663670-46663703(-) | bmo-mir-2808b|nscaf2964:1385681-1385711(+) | 0.76 | |
n-a|chr3:47530247-47530310(-) | osa-MIR1428a|chr01:13159787-13159850(+) | 0.84 | |
RNAz Sequence AGCAUGGGUGACAAAGCAAGACUGUCUCAAAAAAAUAGGACAGCAUCUCACUGCAUCACCCAG RNAz Consensus SS ....(((((((...((..(((((((((..........))))))..)))..))...))))))). CMfinder Sequence NA CMfinder Consensus SS NA | |||
n-a|chr17:40729855-40729989(+) | osa-MIR5514|chr02:22834339-22834382(+) | 0.83 | |
n-a|chr19:39408138-39408201(-) | ppt-MIR1062|scaffold_49:1228164-1228226(-) | 0.84 | |
n-a|chr19:49999690-49999740(+) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.72 | |
n-a|chr6:43445322-43445361(+) | cqu-mir-133|supercont3.1189:55748-55784(+) | 0.74 | |
n-a|chr17:47253535-47253563(+) | osa-MIR5162|chr12:16418640-16418668(+) | 0.77 | |
n-a|chr20:46205611-46205696(+) | osa-MIR1428g|chr10:3960346-3960437(+) | 0.76 | |
n-a|chr8:41128583-41128643(-) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.79 | |
n-a|chr2:42319674-42319758(+) | osa-MIR5538|chr10:21265771-21265854(+) | 0.75 | |
RNAz Sequence NA RNAz Consensus SS NA CMfinder Sequence CAGUGGCCAAAGUACAAACAUUUGCCCUGGUUCUUUGAGUCUCAGGAAGUUGCACAGGAACCAGGGCAAAUGUUUGUACUC CMfinder Consensus SS ::::::::::<<<<<<<<<<<<<<<<<<<<<<<<<<<_______________>>->>>>>>>>>>>>>>>>>>>>>>>>>: | |||
n-a|chr17:43011984-43012047(-) | hsa-mir-1271|chr5:175794960-175795021(+) | 0.78 | |
n-a|chr1:37966535-37966594(-) | hsa-mir-676|chrX:69242714-69242771(+) | 0.86 | |
n-a|chr1:45187859-45187915(+) | tca-mir-3890|chrLG3:21939384-21939436(-) | 0.79 | |
n-a|chr12:40013570-40013614(-) | ame-mir-3734|Group6.21:301078-301126(+) | 0.73 | |
n-a|chr20:49347260-49347294(-) | osa-MIR1857|chr11:2729893-2729925(+) | 0.70 | |
n-a|chr8:50084692-50084759(+) | mmu-mir-5621|chr11:115795824-115795886(+) | 0.73 | |
RNAz Sequence GCCUUAGCUUUCACUUCCGGCUUGUGCAAUGUCACAAGGUCAGCCAGAGGUGACAGCUUAGGACGUU RNAz Consensus SS .(((.((((.(((((((.(((.((.((...........))))))).))))))).)))).)))..... CMfinder Sequence CCUGAGCUUUCACUUCUGGCUUGUGCAGUGUCACAAGGUCAGCCAGAAGUGACAGCUUAGG CMfinder Consensus SS <<<<<<<<-<<<<<<<<<<<<<<<<______>>>>----->>>>>>>>>>>>->>>>>>>> | |||
n-a|chr21:44839358-44839418(-) | osa-MIR395v|chr09:6605582-6605641(-) | 0.84 | |
n-a|chrX:41202503-41202567(+) | hsa-mir-500b|chrX:49775286-49775351(+) | 0.73 | |
n-a|chr6:38607155-38607228(+) | hsa-mir-3199-1|chr22:28316522-28316598(-) | 0.77 | |
n-a|chr21:46796165-46796222(+) | ame-mir-9b|Group15.33:20342-20400(-) | 0.71 | |
n-a|chr3:48521762-48521800(+) | ath-MIR779|chr2:9560866-9560907(+) | 0.77 | |
n-a|chr22:41209894-41209951(-) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.77 | |
RNAz Sequence CCUUCCAAAAGAGCAAUUGCUAUUUAGU__AAAAAAUAAACACCAACUGCUCUUUCAGA RNAz Consensus SS ...((..((((((((.(((...((((..........))))...))).))))))))..)) CMfinder Sequence AAAGAGCAAUUGCUAUUUAGUAAAAAAUAAACACCAACUGCUCUUU CMfinder Consensus SS :<<<<<<<-<<<---<<<<________>>>>--->>>->>>>>>>: | |||
n-a|chr1:43637320-43637379(-) | ppc-mir-2274|Ppa_Contig180:297859-297920(+) | 0.84 | |
n-a|chr14:62214607-62214686(+) | hsa-mir-517c|chr19:54244567-54244644(+) | 0.80 | |
n-a|chr7:64298193-64298269(+) | bmo-mir-2790|nscaf2865:1465803-1465878(-) | 0.76 | |
n-a|chr17:55064828-55064895(-) | osa-MIR1861k|chr08:15129830-15129898(-) | 0.78 | |
n-a|chr7:57257232-57257289(-) | tca-mir-3871|chrLG7:2957140-2957194(+) | 0.77 | |
n-a|chr15:52311759-52311809(-) | osa-MIR5536|chr09:9139162-9139210(-) | 0.76 | |
n-a|chr16:64012786-64012860(-) | osa-MIR169o|chr11:6077368-6077443(-) | 0.78 | |
n-a|chr12:53342901-53342964(+) | mmu-mir-3065|chr11:120014780-120014842(+) | 0.77 | |
n-a|chr15:65067819-65067860(+) | cbr-mir-87|chrV:6389737-6389778(+) | 0.70 | |
n-a|chr1:52082596-52082661(-) | osa-MIR395r|chr04:32437703-32437768(+) | 0.77 | |
n-a|chr15:63282902-63282971(-) | cel-mir-1830|II:4371842-4371911(-) | 0.79 | |
n-a|chr20:52051138-52051167(+) | osa-MIR5162|chr12:16418640-16418668(+) | 0.86 | |
n-a|chr3:51534339-51534410(+) | cbr-mir-80|chrIII:13406599-13406667(-) | 0.74 | |
n-a|chr13:57262632-57262703(+) | osa-MIR1875|chr09:17566957-17567024(-) | 0.72 | |
n-a|chr20:56224498-56224561(-) | hsa-mir-6511a-4|chr16:18437871-18437935(-) | 0.80 | |
n-a|chr14:54415144-54415203(-) | hsa-mir-524|chr19:54214269-54214329(+) | 0.81 | |
n-a|chr18:61056538-61056577(-) | osa-MIR812i|chr07:22151358-22151394(+) | 0.73 | |
n-a|chr11:61602155-61602189(-) | bmo-mir-2775b|nscaf2883:1275550-1275585(-) | 0.72 | |
n-a|chr2:61133777-61133841(-) | bmo-mir-3204b|nscaf1690:5500376-5500441(+) | 0.73 | |
n-a|chr19:54704725-54704767(+) | ppt-MIR1030f|scaffold_435:112651-112693(-) | 0.72 | |
n-a|chr20:60890019-60890060(-) | ame-mir-3763|GroupUn.1127:12726-12763(+) | 0.79 | |
n-a|chr12:52681822-52681923(-) | hsa-mir-1273c|chr6:155174503-155174566(+) | 0.73 | |
n-a|chr2:64068991-64069086(+) | osa-MIR5538|chr10:21265771-21265854(+) | 0.70 | |
n-a|chr19:58629078-58629148(+) | cel-mir-1830|II:4371842-4371911(-) | 0.72 | |
n-a|chr16:55535713-55535738(-) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.88 | |
n-a|chr20:52684956-52685013(-) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.82 | |
n-a|chr5:56332278-56332312(+) | hsa-mir-647|chr20:62574022-62574057(-) | 0.75 | |
n-a|chr3:51534123-51534177(+) | bmo-mir-2777|nscaf2962:512226-512282(-) | 0.75 | |
n-a|chr22:51039592-51039629(-) | ame-mir-3763|GroupUn.1127:12726-12763(+) | 0.80 | |
n-a|chr16:58534046-58534111(+) | cel-mir-790|IV:5566418-5566481(+) | 0.71 | |
n-a|chr11:63393953-63394038(-) | hsa-mir-548y|chr14:48230208-48230278(-) | 0.71 | |
n-a|chr20:57466445-57466502(+) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.75 | |
n-a|chr18:60984347-60984407(-) | hsa-mir-1913|chr6:166922853-166922912(-) | 0.71 | |
n-a|chr15:59063511-59063563(+) | hsa-mir-4537|chr14:106325674-106325721(-) | 0.71 | |
n-a|chr11:60727973-60728006(-) | ath-MIR3440b|chr3:6217557-6217588(+) | 0.70 | |
n-a|chr11:57529326-57529359(+) | cre-MIR918|scaffold_6:1014348-1014380(+) | 0.75 | |
n-a|chr20:52465101-52465160(+) | osa-MIR395v|chr09:6605582-6605641(-) | 0.88 | |
n-a|chr14:53417746-53417787(-) | ath-MIR5656|chr1:1727361-1727408(+) | 0.73 | |
n-a|chr20:52369790-52369861(-) | osa-MIR1861e|chr04:6532014-6532082(+) | 0.80 | |
n-a|chr22:50862786-50862867(+) | osa-MIR5080|chr10:2321004-2321074(-) | 0.79 | |
n-a|chr1:63966759-63966831(-) | spu-mir-2006|gb | 0.76 | |
n-a|chr14:60113680-60113739(-) | cel-mir-800|X:380928-380988(-) | 0.81 | |
RNAz Sequence UUUAACCAGCUUGUCACUCUGUGCCCCAUUUAAAAAGCAUAUAGUAGCAAGCUGGAUAA RNAz Consensus SS .(((((((((((((((((.(((((............))))).))))))))))))))))) CMfinder Sequence UAACCAGCUUGUCACUCUGUGCCCCAUUUAAAAAGCAUAUAGUAACAAGCUGGAUA CMfinder Consensus SS ::<<<<<<<<<<<<<<-<<<<<____________>>>>>->>>>>>>>>>>>>>:: | |||
n-a|chr2:61892496-61892558(+) | ame-mir-3790|Group14.24:673069-673132(-) | 0.73 | |
n-a|chr19:57946692-57946729(+) | osa-MIR5795|chr09:11102758-11102798(-) | 0.75 | |
n-a|chr3:63996227-63996271(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.76 | |
n-a|chr11:60225112-60225224(-) | bmo-mir-3372|scaffold10059:561-653(+) | 0.73 | |
n-a|chr17:60005474-60005510(+) | ame-mir-3763|GroupUn.1127:12726-12763(+) | 0.74 | |
n-a|chr5:64357640-64357704(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.73 | |
n-a|chr17:59940789-59940823(-) | osa-MIR1857|chr11:2729893-2729925(+) | 0.72 | |
n-a|chr15:64673553-64673653(-) | ppt-MIR1055|scaffold_391:252837-252876(-) | 0.73 | |
n-a|chr10:54672475-54672542(+) | cbr-mir-80|chrIII:13406599-13406667(-) | 0.76 | |
n-a|chr9:76365864-76365925(+) | mmu-mir-5127|chr18:81992012-81992072(-) | 0.73 | |
n-a|chr1:76190439-76190523(+) | bmo-mir-3001|nscaf2795:3132223-3132308(-) | 0.70 | |
n-a|chr7:75957248-75957311(-) | dme-mir-4965|X:16500158-16500218(+) | 0.72 | |
n-a|chr10:80412119-80412143(+) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.79 | |
n-a|chr12:72148441-72148505(-) | cbr-mir-85|chrII:3615939-3616004(-) | 0.74 | |
n-a|chr11:75116673-75116732(+) | mmu-mir-3076|chr14:30572149-30572208(+) | 0.73 | |
n-a|chrX:71492453-71492502(-) | osa-MIR1846b|chr11:27244240-27244289(-) | 0.72 | |
n-a|chr2:75317959-75318022(+) | mmu-mir-3085|chr19:42280096-42280160(-) | 0.76 | |
n-a|chr4:69006937-69006965(-) | hsa-mir-4706|chr14:65511411-65511442(+) | 0.71 | |
n-a|chr17:65945730-65945769(-) | osa-MIR812i|chr07:22151358-22151394(+) | 0.74 | |
n-a|chr7:82564994-82565034(-) | ath-MIR831|chr2:10247369-10247411(+) | 0.71 | |
n-a|chr16:81855195-81855250(-) | nve-mir-2027|scaffold_241:295192-295245(+) | 0.71 | |
n-a|chr5:79948127-79948188(+) | hsa-mir-1271|chr5:175794960-175795021(+) | 0.72 | |
n-a|chr15:73076014-73076070(-) | ame-mir-9b|Group15.33:20342-20400(-) | 0.81 | |
n-a|chr16:81705983-81706046(+) | cbr-mir-85|chrII:3615939-3616004(-) | 0.81 | |
n-a|chr2:85173359-85173425(-) | hsa-mir-758|chr14:101492369-101492429(+) | 0.71 | |
n-a|chr15:69747852-69747884(+) | osa-MIR5158|chr08:23990883-23990919(+) | 0.74 | |
n-a|chr4:76895072-76895149(+) | ath-MIR2939|chr5:19566986-19567060(+) | 0.73 | |
n-a|chr11:79133211-79133270(-) | hsa-mir-3152|chr9:18573314-18573370(+) | 0.80 | |
n-a|chr2:70312371-70312435(+) | osa-MIR319b|chr01:6676582-6676646(-) | 0.77 | |
n-a|chr13:76258914-76258974(+) | bfl-mir-96|Bf_V2_186:1109818-1109878(+) | 0.82 | |
n-a|chr12:84544425-84544478(-) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.80 | |
n-a|chr1:81817768-81817794(-) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.79 | |
n-a|chr16:69563692-69563748(+) | hsa-mir-1911|chrX:113997755-113997811(+) | 0.70 | |
n-a|chr2:72376257-72376327(+) | cbr-mir-44|chrII:8049280-8049348(-) | 0.73 | |
n-a|chr12:75641983-75642010(+) | hsa-mir-3162|chr11:59362555-59362583(-) | 0.77 | |
n-a|chr2:68614824-68614859(-) | ath-MIR472|chr1:4182134-4182168(-) | 0.70 | |
n-a|chr9:77791691-77791724(-) | osa-MIR167a|chr12:25443302-25443332(+) | 0.80 | |
n-a|chr2:70456225-70456289(-) | ame-mir-92b-2|GroupUn.1203:2330-2390(+) | 0.71 | |
n-a|chr15:66548888-66548972(+) | cre-MIR911|scaffold_7:773098-773178(-) | 0.79 | |
n-a|chr15:81243503-81243588(+) | osa-MIR5538|chr10:21265771-21265854(+) | 0.77 | |
n-a|chr18:77985720-77985790(-) | osa-MIR5075|chr11:7874360-7874425(-) | 0.72 | |
n-a|chr2:66585389-66585452(-) | cte-mir-125|scaffold_135:290567-290628(+) | 0.76 | |
n-a|chr6:72117050-72117125(-) | cel-mir-1830|II:4371842-4371911(-) | 0.77 | |
n-a|chr2:74153806-74153873(-) | hsa-mir-1972-1|chr16:15104186-15104254(-) | 0.72 | |
n-a|chr13:72680222-72680269(-) | bmo-mir-9d|nscaf2176:353056-353103(-) | 0.83 | |
n-a|chr2:77330289-77330318(+) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.72 | |
n-a|chr11:84807690-84807757(-) | cel-mir-1020|III:10047655-10047724(-) | 0.78 | |
n-a|chr2:71299407-71299448(+) | osa-MIR5158|chr08:23990883-23990919(+) | 0.72 | |
n-a|chr2:83743125-83743187(+) | cel-mir-4812|X:15242711-15242770(-) | 0.79 | |
n-a|chr12:75874533-75874673(+) | osa-MIR2872|chr11:2521152-2521256(+) | 0.73 | |
n-a|chr17:73031733-73031782(+) | tca-mir-3890|chrLG3:21939384-21939436(-) | 0.70 | |
n-a|chr17:79780680-79780734(-) | mmu-mir-5125|chr17:23823303-23823359(+) | 0.82 | |
n-a|chr17:67095710-67095768(-) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.81 | |
n-a|chr4:74125147-74125218(-) | hsa-mir-6127|chr1:22959780-22959851(-) | 0.74 | |
n-a|chr1:70687264-70687342(+) | ppt-MIR1037|scaffold_100:446986-447064(+) | 0.74 | |
n-a|chr14:69261939-69261970(-) | bmo-mir-3264|nscaf3032:2071806-2071837(+) | 0.74 | |
n-a|chr13:83675126-83675165(-) | bmo-mir-2855|nscaf2912:142836-142872(-) | 0.71 | |
n-a|chr16:81513507-81513544(+) | hsa-mir-548aa-2|chr17:65467656-65467690(+) | 0.71 | |
n-a|chr4:95572111-95572150(+) | osa-MIR1882g|chr11:20362607-20362645(+) | 0.77 | |
n-a|chr5:93955136-93955209(+) | ppt-MIR1223e|scaffold_57:332579-332651(+) | 0.73 | |
n-a|chr12:104824834-104824896(+) | mmu-mir-5616|chr4:149537863-149537922(+) | 0.74 | |
RNAz Sequence UGCUGCAAAGAGCUGCCCAAAACAAAUAUAUAUACUUGUUUUGGG RNAz Consensus SS .(((......)))..((((((((((.((....)).)))))))))) CMfinder Sequence NA CMfinder Consensus SS NA | |||
n-a|chr1:85666853-85666889(+) | bmo-mir-2775b|nscaf2883:1275550-1275585(-) | 0.72 | |
n-a|chr5:95591530-95591562(+) | cre-MIR918|scaffold_6:1014348-1014380(+) | 0.71 | |
n-a|chr15:93443548-93443591(+) | bmo-mir-2841|nscaf2828:3962841-3962887(-) | 0.70 | |
n-a|chr10:88509076-88509104(-) | ath-MIR847|chr1:2165569-2165596(+) | 0.71 | |
n-a|chrX:91454956-91455036(+) | osa-MIR395k|chr08:3298667-3298744(+) | 0.75 | |
n-a|chr1:95643149-95643178(-) | hsa-mir-3198-1|chr22:18246994-18247023(-) | 0.80 | |
n-a|chr1:89357176-89357247(-) | osa-MIR1881|chr12:5724937-5725005(+) | 0.75 | |
n-a|chr5:106773839-106773898(-) | crm-mir-239a|Crem_Contig93:351760-351819(-) | 0.76 | |
n-a|chr12:104341650-104341690(+) | osa-MIR5795|chr09:11102758-11102798(-) | 0.72 | |
n-a|chr15:97127816-97127881(+) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.80 | |
n-a|chr7:106809435-106809492(+) | ppt-MIR893|scaffold_348:182953-183006(+) | 0.78 | |
n-a|chr5:99390218-99390299(+) | ppt-MIR2081|scaffold_3:3507268-3507348(+) | 0.70 | |
n-a|chr15:88918863-88918930(+) | bmo-mir-3204b|nscaf1690:5500376-5500441(+) | 0.71 | |
n-a|chr15:93375111-93375137(-) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.76 | |
n-a|chr15:85697761-85697839(+) | ppc-let-7|Ppa_Contig31:197585-197662(+) | 0.76 | |
RNAz Sequence UUUCCUAAUCACAUAUUGCUUCUGAAGUGUGGAAGGGGAAGCAAUGUGUGAUUA_GGAAAAGAAGUGGAAGGAAAUACC RNAz Consensus SS ((((((((((((((((((((((...............))))))))))))))))).)))))................... CMfinder Sequence UUUCCUAAUCACAUAUUGCUUCUGAAGUGUGGAAGGGGAAGCAAUGUGUGAUUAGGAAAAGAAGUGG CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<<<<<_____________>>>>>>>>>>>>>>>>>>>>>>>:::::::: | |||
n-a|chr12:104234957-104235034(-) | bmo-mir-3385|scaffold772:8756-8831(+) | 0.71 | |
n-a|chr8:90898533-90898570(+) | ath-MIR779|chr2:9560866-9560907(+) | 0.79 | |
n-a|chr6:90517806-90517831(-) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.79 | |
n-a|chr3:100467748-100467808(+) | osa-MIR5539|chr12:20520344-20520379(-) | 0.71 | |
n-a|chr11:85347516-85347545(+) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.80 | |
n-a|chr10:88171434-88171475(+) | osa-MIR5147|chr02:17044314-17044352(-) | 0.71 | |
n-a|chrX:107294695-107294726(-) | osa-MIR1882g|chr11:20362607-20362645(+) | 0.73 | |
n-a|chr2:96754614-96754678(-) | osa-MIR1879|chr10:5651860-5651927(+) | 0.76 | |
n-a|chr10:97888142-97888207(-) | hsa-mir-519a-1|chr19:54255662-54255724(+) | 0.74 | |
RNAz Sequence GCUAACCAAUAUGUUCAAAACCUGAAAGGAGAUCAAGAGAAACCUUUCAGGUUUUGAACAU_AGAG RNAz Consensus SS .................................................................. CMfinder Sequence UAUGUUCAAAACCUGAAAGGAGAUCAAGAGAAACCUUUCAGGUUUUGAACAUA CMfinder Consensus SS :<<<<<<<<<<<<<<<<<<<---<<____>>-->>>>>>>>>>>>>>>>>>>: | |||
n-a|chr7:99020616-99020650(-) | ath-MIR862|chr2:10718103-10718136(+) | 0.73 | |
n-a|chr10:104725551-104725606(+) | hsa-mir-1909|chr19:1816173-1816230(-) | 0.74 | |
n-a|chr15:99327664-99327725(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.83 | |
n-a|chr4:99416917-99416987(-) | cel-mir-1020|III:10047655-10047724(-) | 0.70 | |
n-a|chr16:85951957-85952023(+) | osa-MIR1428a|chr01:13159787-13159850(+) | 0.74 | |
n-a|chr8:97370963-97371034(+) | ppt-MIR1223e|scaffold_57:332579-332651(+) | 0.75 | |
n-a|chr11:85989376-85989440(+) | cbr-mir-85|chrII:3615939-3616004(-) | 0.81 | |
n-a|chr16:89626882-89626947(-) | osa-MIR319b|chr01:6676582-6676646(-) | 0.77 | |
n-a|chr14:106326531-106326592(-) | cel-mir-4812|X:15242711-15242770(-) | 0.81 | |
RNAz Sequence AG____CUCAGCUCAGCUCA_____ACCCAGUUCA_____ACUCAG_________CCCAGUUCAGCUCAGCUCAGCCCA RNAz Consensus SS .........((((.((((.............................................)))).))))....... CMfinder Sequence GUUCAACUCAGCCCAGUUCAGCUCAGCUCAGC CMfinder Consensus SS ::::::::::<<--<<_____>>-->>::::: | |||
n-a|chr15:99440505-99440547(+) | osa-MIR5795|chr09:11102758-11102798(-) | 0.73 | |
n-a|chr14:93214938-93214972(-) | ppt-MIR1051|scaffold_56:1824653-1824690(+) | 0.70 | |
n-a|chr5:93903320-93903363(-) | cre-MIR910|scaffold_17:966156-966199(+) | 0.72 | |
n-a|chr1:85599488-85599545(+) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.83 | |
RNAz Sequence AGUUGCCUUUUUGUUCCCAUGCUGGUUAAGCCUAGCAUAGGCACCAAAAAGCAACAA RNAz Consensus SS .(((((.((((.((.((.((((((........)))))).)).)).)))).))))).. CMfinder Sequence GUUGCCUUUUUGUUCCCAUGCUG-UUuAAGCCUAGCAUAGGCACCAAAAAGCAAC CMfinder Consensus SS <<<<<-<<<<<<--<<-<<<<<<<__.____>>>>>>>->>--->>>>>>>>>>> | |||
n-a|chr13:93142395-93142473(+) | hsa-mir-518c|chr19:54211992-54212072(+) | 0.71 | |
n-a|chr5:95223065-95223131(-) | crm-mir-46|Crem_Contig12:1283924-1283990(-) | 0.74 | |
n-a|chr5:93855553-93855640(+) | ppt-MIR166e|scaffold_36:478480-478566(-) | 0.70 | |
RNAz Sequence NA RNAz Consensus SS NA CMfinder Sequence UGAGUAUAUGUGCUUAUAUAUAUGCGUAUAUUUAAUAAACAGAUAAAGGAGCUUAUAUGUGUAUAAGCAUAUAUACUCAUU CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<<<<<--<<<_________________________>>>>>>>>>>>>>>>>>>>>>>>>>>:: | |||
n-a|chr12:109042144-109042210(-) | mmu-mir-344f|chr7:62046181-62046248(-) | 0.75 | |
RNAz Sequence UGGCCACACUUGGCUCCUUUAAUGGGGCUAAAGGAGCUUUAACUCCGUUAAAGGAGGCAAGUGUGG RNAz Consensus SS .....(((((((.((((((((((((((((.....)))))......))))))))))).))))))).. CMfinder Sequence UUGGCUCCUUUAAUGGGGCUAAAGGAGCUUUAA CMfinder Consensus SS ::<<<<<<<<<<_______>>>>>>>>>>:::: | |||
n-a|chr6:105046138-105046160(-) | hsa-mir-4502|chr13:115039353-115039382(+) | 0.72 | |
n-a|chr8:99405892-99405955(-) | hsa-mir-34b|chr11:111383673-111383736(+) | 0.76 | |
RNAz Sequence GCUCCCUAGUCUACUGGAGGAUAAGAGACCUUUAUAUCCUCUUAUCCUCCAGUAGGCUGGGGA RNAz Consensus SS .....(((((((((((((((((((((.............)))))))))))))))))))))... CMfinder Sequence CCCUAGUCUACUGGAGGAUAAGAGACCUUUAUAUCCUCUUAUCCUCCAGUAGGCUGGGG CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<<<<<<___________>>>>>>>>>>>>>>>>>>>>>>>> | |||
n-a|chr7:92242649-92242715(-) | bfl-mir-252b|Bf_V2_101:1038254-1038320(+) | 0.77 | |
n-a|chr1:98510826-98510886(-) | ppc-mir-2274|Ppa_Contig180:297859-297920(+) | 0.74 | |
n-a|chrX:106938596-106938633(-) | osa-MIR5147|chr02:17044314-17044352(-) | 0.74 | |
n-a|chr15:85923833-85923892(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.81 | |
n-a|chr3:98691200-98691321(+) | bmo-mir-3384|nscaf1690:1480845-1480966(-) | 0.78 | |
n-a|chr10:102121546-102121617(+) | hsa-mir-219-2|chr9:131154912-131154979(-) | 0.70 | |
RNAz Sequence AGAUGUCCAGCCACAAUUCUCGGUU_____GGCCGCAG__ACUCGUACAAGAAUUGCGUUUGGACAAUCAGU RNAz Consensus SS .((((((((..(.(((((((((((.......))))..............))))))).)..))))).)))... CMfinder Sequence UGUCCAGCCACAAUUCUCGGUUGGCCGCAGACUCGUACAAGAAUUGCGUUUGGACAAUCAG CMfinder Consensus SS <<<<<<<---<<<<<<<-<<____>>------------->>>>>>>--->>>>>>>::::: | |||
n-a|chr7:88657071-88657132(-) | hsa-mir-3189|chr19:18497380-18497441(+) | 0.80 | |
n-a|chr12:104825438-104825498(+) | osa-MIR5525|chr09:3903322-3903385(-) | 0.81 | |
n-a|chr13:97079481-97079549(+) | osa-MIR5157a|chr08:21473455-21473524(-) | 0.78 | |
n-a|chr4:89996220-89996251(+) | osa-MIR1857|chr11:2729893-2729925(+) | 0.72 | |
n-a|chr9:93909955-93909992(-) | osa-MIR1428f|chr07:5450399-5450430(-) | 0.71 | |
n-a|chr10:103662351-103662421(-) | osa-MIR398b|chr07:14597636-14597701(-) | 0.70 | |
RNAz Sequence AGAGCAAACAAAGAGCUGUGGUAGAAAGUGAUUUGCAACCUUACUUUCUACCACAGCUCUUUGUCUGCAA RNAz Consensus SS ...(((.(((((.((((.(((..((((.(((.........))).))))..))).)))).))))).))).. CMfinder Sequence GCAAACAAAG.AGCUGUGGUAGAAAGUGAUUUGCAACCUUACUUUCUACCACAGCUC.UUUGUCUGC CMfinder Consensus SS <<<-<<<<<<.<<<<<<<<<<<<<<<<<<_________>>>>>>>>>>>>>>>>>>>.>>>>>->>> | |||
n-a|chr6:120144252-120144312(+) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.82 | |
n-a|chr1:115268842-115268883(-) | hsa-mir-636|chr17:74732541-74732583(-) | 0.72 | |
n-a|chr12:115479485-115479548(+) | osa-MIR5075|chr11:7874360-7874425(-) | 0.82 | |
n-a|chr11:122022828-122022867(-) | osa-MIR171i|chr03:21190120-21190156(+) | 0.76 | |
n-a|chrX:123530141-123530177(-) | osa-MIR1431|chr01:4765491-4765525(-) | 0.77 | |
n-a|chr3:122692547-122692608(-) | cel-mir-49|X:9989244-9989306(+) | 0.83 | |
n-a|chr4:111119730-111119771(-) | cqu-mir-133|supercont3.1189:55748-55784(+) | 0.74 | |
n-a|chr8:124025697-124025735(-) | cbr-mir-87|chrV:6389737-6389778(+) | 0.77 | |
n-a|chr5:134164846-134164893(+) | ame-mir-3764|Group11.35:218239-218280(-) | 0.73 | |
n-a|chr3:120768497-120768552(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.80 | |
RNAz Sequence CUUAUCCUGCAAGGUGCU_CAGAGA__AGGCCUGUAGCACCUUGCAGGAUAAGGC RNAz Consensus SS ((((((((((((((((((((((.........)))))))))))))))))))))).. CMfinder Sequence NA CMfinder Consensus SS NA | |||
n-a|chr7:112090514-112090572(+) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.75 | |
n-a|chr10:121718033-121718093(+) | hsa-mir-544a|chr14:101515010-101515070(+) | 0.90 | |
n-a|chr11:126173840-126173907(-) | mmu-mir-1264|chrX:147010614-147010679(+) | 0.76 | |
n-a|chr5:123095929-123096006(-) | osa-MIR169o|chr11:6077368-6077443(-) | 0.70 | |
n-a|chr9:131154912-131154977(+) | ppt-MIR1062|scaffold_49:1228164-1228226(-) | 0.85 | |
n-a|chr9:128509401-128509436(+) | osa-MIR395l|chr08:3299060-3299093(+) | 0.73 | |
n-a|chr9:135996571-135996629(-) | ame-mir-9b|Group15.33:20342-20400(-) | 0.74 | |
n-a|chr1:112962108-112962164(+) | osa-MIR5504|chr10:17156969-17157026(-) | 0.75 | |
n-a|chr10:134753824-134753884(-) | hsa-mir-105-1|chrX:151560703-151560762(-) | 0.76 | |
RNAz Sequence CUGUCAAGCUUGCACAAAACUGAUUUGAAUAGGAUAUGAAUCAGUUU_UGUGCAAGCUUAA RNAz Consensus SS .....(((((((((((((((((((((...........)))))))))).))))))))))).. CMfinder Sequence CUGUCAAGCUUGCACAAAACUGAUUUGAAUAGGAUAUGAAUCAGUUUUGUGCAAGCUUA CMfinder Consensus SS :::::<<<<<<<<<<<<<<<<<<<<<___________>>>>>>>>>>>>>>>>>>>>>: | |||
n-a|chr9:130743559-130743601(+) | osa-MIR5795|chr09:11102758-11102798(-) | 0.73 | |
n-a|chr3:129035077-129035130(-) | osa-MIR399e|chr01:30476623-30476675(-) | 0.77 | |
n-a|chr12:122240782-122240851(-) | osa-MIR1861e|chr04:6532014-6532082(+) | 0.79 | |
n-a|chr12:111021055-111021093(-) | osa-MIR2866|chr03:7330614-7330693(-) | 0.72 | |
n-a|chr2:113089281-113089309(-) | bmo-mir-2808b|nscaf2964:1385681-1385711(+) | 0.85 | |
n-a|chr9:113826640-113826666(+) | osa-MIR2871a|chr05:3877072-3877101(+) | 0.79 | |
n-a|chr4:119644632-119644661(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.79 | |
n-a|chr7:126859163-126859235(-) | ath-MIR2939|chr5:19566986-19567060(+) | 0.70 | |
n-a|chr12:120967999-120968033(+) | bmo-mir-2775b|nscaf2883:1275550-1275585(-) | 0.77 | |
n-a|chr9:128230314-128230375(-) | hsa-mir-487a|chr14:101518792-101518852(+) | 0.83 | |
n-a|chr12:132405752-132405780(+) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.77 | |
n-a|chr3:124953806-124953859(-) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.74 | |
n-a|chr12:121312437-121312496(-) | hsa-mir-450a-2|chrX:133674557-133674616(-) | 0.79 | |
RNAz Sequence ACAUGCCUUGCUUCCAAUAUGACAUCAAUAUUCCUGUCGAUGUCACAUUGGAAGCAGAG RNAz Consensus SS .......(((((((((((.(((((((.(((....))).))))))).))))))))))).. CMfinder Sequence UUGCUUCCAAUAUGGCAUCAAUAUUCCUGUCGAUGUCACACUGGAAGCAG CMfinder Consensus SS <<<<<<<<<<<-<<<<<<<-<<<____>>>->>>>>>>->>>>>>>>>>> | |||
n-a|chr3:122295158-122295227(+) | bfl-mir-34c-1|Bf_V2_269:1088514-1088576(-) | 0.71 | |
n-a|chr7:138728844-138728904(-) | mmu-mir-3078|chr14:64591200-64591261(+) | 0.77 | |
n-a|chr13:111367643-111367703(-) | osa-MIR5540|chr01:35551694-35551761(-) | 0.70 | |
n-a|chr5:118691392-118691420(-) | hsa-mir-4419b|chr12:128729079-128729111(+) | 0.72 | |
n-a|chr6:111611320-111611348(+) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.76 | |
n-a|chr11:122026903-122026967(-) | osa-MIR1428a|chr01:13159787-13159850(+) | 0.80 | |
n-a|chr3:123303861-123303908(-) | ath-MIR870|chr5:21395550-21395629(-) | 0.77 | |
n-a|chr3:125094236-125094305(+) | osa-MIR1861k|chr08:15129830-15129898(-) | 0.77 | |
n-a|chr9:137700480-137700534(+) | bfl-mir-2068|Bf_V2_32:1589826-1589883(-) | 0.84 | |
n-a|chr5:130547619-130547672(+) | osa-MIR5514|chr02:22834339-22834382(+) | 0.82 | |
n-a|chr2:122758756-122758815(+) | osa-MIR319b|chr01:6676582-6676646(-) | 0.77 | |
n-a|chrX:125864878-125864905(-) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.73 | |
n-a|chr12:133443275-133443341(-) | hsa-mir-516a-2|chr19:54264399-54264464(+) | 0.79 | |
n-a|chr1:113230668-113230722(+) | mmu-mir-3091|chr2:180257545-180257601(+) | 0.76 | |
RNAz Sequence UGCCCCCAGACUGGGCUCAGUGUCCC__UCUGUGGCACUGAGCCCCUCU__GUGG____CCG RNAz Consensus SS ............((((((((((((.........)))))))))).))................ CMfinder Sequence GGGCUCAGUGUCCCUCUGUGGCACUGAGCCC CMfinder Consensus SS <<<<<<<<<<<<_______>>>>>>>>>>>> | |||
n-a|chr8:122114324-122114350(-) | osa-MIR396b|chr06:3668737-3668765(+) | 0.71 | |
n-a|chr12:121232074-121232110(-) | osa-MIR5147|chr02:17044314-17044352(-) | 0.70 | |
n-a|chr12:109336038-109336090(+) | tca-mir-3871|chrLG7:2957140-2957194(+) | 0.71 | |
n-a|chr1:121356566-121356602(-) | hsa-mir-3184|chr17:28444113-28444149(-) | 0.73 | |
n-a|chr9:132175559-132175610(-) | hsa-mir-548ak|chr10:12172759-12172815(-) | 0.71 | |
n-a|chr1:149909462-149909504(+) | cbr-mir-87|chrV:6389737-6389778(+) | 0.74 | |
n-a|chr4:146483383-146483420(+) | osa-MIR5340|chr02:5683422-5683456(-) | 0.71 | |
n-a|chr1:150336039-150336107(-) | osa-MIR2875|chr08:27089356-27089426(+) | 0.75 | |
n-a|chrX:152716636-152716672(-) | ath-MIR4240|chr4:10711573-10711607(-) | 0.75 | |
n-a|chr6:157733480-157733553(-) | ath-MIR5645c|chr3:14742730-14742804(+) | 0.74 | |
n-a|chr7:139246315-139246356(-) | osa-MIR5795|chr09:11102758-11102798(-) | 0.73 | |
n-a|chr5:176722871-176722908(+) | ath-MIR163|chr1:24884066-24884102(+) | 0.71 | |
n-a|chr8:142318386-142318479(-) | bmo-mir-3326|scaffold418:171282-171375(+) | 0.71 | |
n-a|chr5:150603589-150603653(-) | bfl-mir-34c-1|Bf_V2_269:1088514-1088576(-) | 0.87 | |
n-a|chr9:139901976-139902038(-) | crm-mir-237|Crem_Contig43:596121-596181(+) | 0.87 | |
n-a|chr6:143382674-143382714(-) | bmo-mir-2855|nscaf2912:142836-142872(-) | 0.72 | |
n-a|chr5:140812434-140812489(+) | hsa-mir-676|chrX:69242714-69242771(+) | 0.71 | |
n-a|chr3:160152672-160152740(+) | osa-MIR395q|chr04:32437560-32437625(+) | 0.73 | |
n-a|chr1:153963237-153963298(+) | hsa-mir-2116|chr15:59463392-59463452(-) | 0.72 | |
n-a|chr9:140024244-140024301(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.83 | |
n-a|chr6:142334797-142334860(+) | cbr-mir-85|chrII:3615939-3616004(-) | 0.73 | |
n-a|chr1:157042972-157043006(+) | osa-MIR5158|chr08:23990883-23990919(+) | 0.77 | |
n-a|chr7:156401961-156402018(+) | bmo-mir-2822-1|nscaf1690:3605487-3605539(-) | 0.73 | |
n-a|chr6:140971516-140971554(-) | hsa-mir-3917|chr1:26232904-26232945(-) | 0.72 | |
n-a|chr8:144815258-144815314(-) | hsa-mir-570|chr3:195426296-195426352(+) | 0.80 | |
n-a|chr1:160309851-160309887(-) | osa-MIR812i|chr07:22151358-22151394(+) | 0.74 | |
n-a|chr6:159240334-159240371(-) | osa-MIR5147|chr02:17044314-17044352(-) | 0.72 | |
n-a|chr1:171482117-171482295(+) | mmu-mir-3063|chr11:95963298-95963372(-) | 0.77 | |
n-a|chr1:173833811-173833874(-) | hsa-mir-494|chr14:101495985-101496042(+) | 0.71 | |
n-a|chr5:168342402-168342468(-) | mmu-mir-5134|chr17:24234534-24234597(-) | 0.73 | |
n-a|chr8:141522201-141522238(+) | ath-MIR5645f|chr5:14946892-14946931(-) | 0.75 | |
n-a|chrX:142525812-142525876(-) | mmu-mir-344i|chr7:62085233-62085298(-) | 0.87 | |
n-a|chr2:140979213-140979272(-) | osa-MIR5504|chr10:17156969-17157026(-) | 0.74 | |
n-a|chr1:162499238-162499390(+) | ppt-MIR2084|scaffold_3:3110270-3110339(+) | 0.70 | |
n-a|chr5:142306556-142306626(+) | spu-mir-153|gb | 0.86 | |
n-a|chr5:156944584-156944612(-) | ppt-MIR1048|scaffold_248:120191-120219(-) | 0.77 | |
n-a|chr6:165285353-165285410(-) | bfl-mir-33-2|Bf_V2_21:4947959-4948018(-) | 0.75 | |
n-a|chr1:150601525-150601562(-) | osa-MIR5147|chr02:17044314-17044352(-) | 0.71 | |
n-a|chr8:146227266-146227324(-) | hsa-mir-3152|chr9:18573314-18573370(+) | 0.87 | |
n-a|chr3:152181137-152181206(+) | hsa-mir-3135a|chr3:20179066-20179133(+) | 0.78 | |
n-a|chr1:178646897-178646957(+) | bfl-mir-34c-1|Bf_V2_269:1088514-1088576(-) | 0.85 | |
RNAz Sequence AGAGUUAACUUGAAAUGGACUAAUUUUUCCACUAGUUAGUCCAUUUCAAGUUAACUCUGU RNAz Consensus SS (((((((((((((((((((((((((........))))))))))))))))))))))))).. CMfinder Sequence AGAGUUAACUCAAAAUGGACUAAUUUUUCCACUAGUUAGUCCAUUUCAAGUUAACUCU CMfinder Consensus SS :<<<<<<<<<-<<<<<<<<<<<<<<________>>>>>>>>>>>>>>->>>>>>>>>: | |||
n-a|chr8:141475109-141475153(+) | cre-MIR912|scaffold_35:929979-930022(-) | 0.83 | |
n-a|chr5:142562552-142562578(-) | hsa-mir-3162|chr11:59362555-59362583(-) | 0.76 | |
n-a|chr6:142693754-142693820(+) | hsa-mir-301a|chr17:57228507-57228573(-) | 0.75 | |
n-a|chr4:163191209-163191234(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.76 | |
n-a|chr6:146864640-146864705(-) | osa-MIR5075|chr11:7874360-7874425(-) | 0.84 | |
n-a|chr4:170997539-170997570(-) | osa-MIR2871a|chr05:3877072-3877101(+) | 0.75 | |
n-a|chr8:143407876-143407943(-) | osa-MIR5075|chr11:7874360-7874425(-) | 0.81 | |
n-a|chr1:161696591-161696742(-) | osa-MIR1428e|chr03:23075359-23075459(+) | 0.70 | |
n-a|chr1:150849338-150849378(+) | ath-MIR5645f|chr5:14946892-14946931(-) | 0.71 | |
n-a|chr6:142308570-142308638(-) | hsa-mir-6511b-1|chr16:2156677-2156746(-) | 0.76 | |
n-a|chr1:152009419-152009450(-) | hsa-mir-3162|chr11:59362555-59362583(-) | 0.73 | |
n-a|chr5:176980351-176980407(-) | hsa-mir-518e|chr19:54233106-54233165(+) | 0.83 | |
n-a|chr3:169814904-169814976(-) | tca-mir-3870|chrLG5:12805214-12805284(-) | 0.76 | |
n-a|chr1:178712689-178712748(+) | hsa-mir-570|chr3:195426296-195426352(+) | 0.81 | |
RNAz Sequence UUGAUGUUGCCACGGAACUAAUUUAAGUU_AAAAAAAUUGGUUCUGUGGCAACAUCGAUA RNAz Consensus SS ((((((((((((((((((((((((..........)))))))))))))))))))))))).. CMfinder Sequence UUGAUGUUGCCAUGGAACUAAUUUAAGUUAAAAAAAUUAGUUCUGUGGCAACAUCGA CMfinder Consensus SS :<<<<<<<<<<<<<<<<<<<<<<<_________>>>>>>>>>>>>>>>>>>>>>>>: | |||
n-a|chr3:149089580-149089648(-) | hsa-mir-548t|chr4:174189315-174189382(+) | 0.73 | |
n-a|chr1:182991687-182991740(+) | mmu-mir-5617|chrX:20863126-20863182(-) | 0.70 | |
n-a|chr2:197519667-197519742(-) | osa-MIR169o|chr11:6077368-6077443(-) | 0.71 | |
n-a|chr2:242524376-242524404(-) | bmo-mir-2808b|nscaf2964:1385681-1385711(+) | 0.82 | |
n-a|chr3:189900520-189900616(+) | ath-MIR5648|chr1:11499446-11499563(+) | 0.71 | |
n-a|chr2:217001883-217001948(+) | bfl-mir-124|Bf_V2_32:1879934-1879995(+) | 0.78 | |
n-a|chr3:187482291-187482342(+) | bmo-mir-9d|nscaf2176:353056-353103(-) | 0.71 | |
n-a|chr2:191745546-191745612(+) | hsa-mir-548y|chr14:48230208-48230278(-) | 0.73 | |
n-a|chr2:240273427-240273488(-) | cbr-mir-246|chrIV:5799938-5799999(-) | 0.89 | |
n-a|chr2:189839174-189839234(+) | hsa-mir-362|chrX:49773573-49773635(+) | 0.72 | |
RNAz Sequence UC__________CU_U___UUUGCACAAAGAGUCU_CAUGUCUGAUAUUUAGACAUGAUGAGCUUUGUGCAAA RNAz Consensus SS ...................(((((((((((......(((((((((...))))))))).....))))))))))) CMfinder Sequence UUGCACAAAGAGUCUCAUGUCUGAUAUUUAGACAUGAUGAGCUUUGUGCAA CMfinder Consensus SS :<<<<<<<<<----<<<<<<<<<<___>>>>>>>>>>---->>>>>>>>>: | |||
n-a|chr3:186288031-186288090(-) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.80 | |
n-a|chr1:224585930-224586015(-) | ppt-MIR166e|scaffold_36:478480-478566(-) | 0.71 | |
n-a|chr2:219144848-219144910(-) | cel-mir-355|II:11833495-11833556(-) | 0.85 | |
n-a|chr1:214673355-214673416(-) | hsa-mir-518f|chr19:54203282-54203342(+) | 0.82 | |
RNAz Sequence AGAAUGAGAAAAUGUCACACAUUGUC__CAAAUGUCCACAAAUGUGUGACAUUUUCUCAUU RNAz Consensus SS ..((((((((((((((...............................)))))))))))))) CMfinder Sequence AUGAGAAAAUGUCACACAUUGUCCGCAAAUGUCCACAAAUGUGGGACAUUUUCUCAU CMfinder Consensus SS :<<<<<<<<<<<<<<<<<<___________________>>>>>>>>>>>>>>>>>>: | |||
n-a|chr1:212782101-212782129(+) | hsa-mir-4492|chr11:118781469-118781496(+) | 0.73 | |
n-a|chr2:187350979-187351053(+) | hsa-mir-548al|chr11:74110291-74110367(+) | 0.74 | |
n-a|chr1:207217192-207217226(-) | osa-MIR5340|chr02:5683422-5683456(-) | 0.70 | |
n-a|chr2:211421515-211421549(+) | osa-MIR1854|chr08:7857379-7857408(-) | 0.71 | |
n-a|chr1:243509488-243509549(+) | ppc-mir-2233|Ppa_Contig180:297988-298048(+) | 0.79 | |
RNAz Sequence AUUGUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUGAGACCAAAGAGCUACUU RNAz Consensus SS ..........((((..(((....)))...))))............................ CMfinder Sequence GUUCUUUGGUCUUUCAGCCAUGACCUGACCUUCUGUCUGUGAGACCAAAGAAC CMfinder Consensus SS <<<<<<<<<<<<<-<<<-<<-<<________>>>>->>>->>>>>>>>>>>>> | |||
n-a|chr1:207103724-207103760(-) | bmo-mir-2855|nscaf2912:142836-142872(-) | 0.78 | |
n-a|chr1:206907408-206907475(+) | osa-MIR5157a|chr08:21473455-21473524(-) | 0.77 | |
n-a|chr1:229206971-229207031(+) | osa-MIR5525|chr09:3903322-3903385(-) | 0.72 | |
n-a|chr2:211469887-211469970(+) | ath-MIR870|chr5:21395550-21395629(-) | 0.75 | |
n-a|chr3:183523934-183524001(+) | osa-MIR319b|chr01:6676582-6676646(-) | 0.80 | |
RNAz Sequence UAAGGCCAUCGUAAGUUGAAAAUAUCCUAAGUC_AAAAAUGAUAUUUUCAACUU_ACGAUGGGUUUUUC RNAz Consensus SS .(((.(((((((((((((((((((((..............)))))))))))))).))))))).)))... CMfinder Sequence AUCGUAAGUUGAAAAUAUCCUAAGUCAAAAAUGAUAUUUUCAACUUACGAUGGGUUU CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<_____________>>>>>>>>>>>>>>>>>>>:::::: | |||
n-a|chr1:193126395-193126457(+) | hsa-mir-524|chr19:54214269-54214329(+) | 0.84 | |
RNAz Sequence G___CCUGUUCGUAAAUGUUAGUGCAUUAUUA___UACAUUGCACUAACAUUUAUGAACAG_CAG RNAz Consensus SS ................................................................. CMfinder Sequence CUGUUCGUAAAUGUUAGUGGAUUAUUACAUUACAUUGCACUAACGUUUAUGAACAG CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<__________________>>>>>>>>>>>>>>>>>>> | |||
n-a|chr2:190243472-190243512(+) | ppt-MIR1051|scaffold_56:1824653-1824690(+) | 0.73 | |
n-a|chr1:243959581-243959637(-) | cel-mir-1834|IV:6660451-6660508(-) | 0.89 | |
n-a|chr3:188358330-188358381(+) | osa-MIR399e|chr01:30476623-30476675(-) | 0.73 | |
n-a|chr2:209136489-209136519(+) | hsa-mir-3199-2|chr22:28316514-28316544(+) | 0.77 | |
n-a|chr1:244615161-244615191(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.74 | |
n-a|chr1:235691696-235691720(+) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.73 | |
n-a|chr2:225368484-225368519(-) | osa-MIR5158|chr08:23990883-23990919(+) | 0.78 | |
n-a|chr1:202311302-202311339(+) | hsa-mir-4706|chr14:65511411-65511442(+) | 0.73 | |
n-a|chr2:232227433-232227491(+) | mmu-mir-3098|chr6:125195807-125195867(+) | 0.83 | |
n-a|chr2:233415201-233415255(-) | bmo-mir-2777|nscaf2962:512226-512282(-) | 0.73 | |
n-a|chr2:217540033-217540164(-) | osa-MIR5151|chr05:3661567-3661614(-) | 0.70 | |
n-a|chr1:186651060-186651097(-) | osa-MIR812i|chr07:22151358-22151394(+) | 0.75 | |
n-a|chr3:185634914-185634987(-) | osa-MIR395f|chr04:31619676-31619748(-) | 0.75 | |
n-a|chr17:20841720-20841781(+) | hsa-mir-519b|chr19:54198478-54198538(+) | 0.82 | |
RNAz Sequence AUAAUAGUCUCCAACUCUGAUUGGUUAAGAUUGUGCAAUCAGAGAUGGAGAUUAUUAUCCA RNAz Consensus SS (((((((((((((.(((((((((............))))))))).)))))))))))))... CMfinder Sequence CUCCAACUCUGAUUGGUUAAGAUUGUGCAAUCAGAGAUGGAA CMfinder Consensus SS <<<<<-<<<<<<<<<____________>>>>>>>>>->>>>> | |||
n-a|chr9:20411156-20411223(-) | osa-MIR398b|chr07:14597636-14597701(-) | 0.71 | |
n-a|chr17:20904488-20904598(-) | bmo-mir-3295|scaffold10686:125-183(+) | 0.70 | |
n-a|chr16:19615419-19615472(-) | nve-mir-2027|scaffold_241:295192-295245(+) | 0.79 | |
n-a|chr6:21997944-21998002(-) | tca-mir-3876|chrLG9:8557825-8557875(+) | 0.70 | |
n-a|chr17:17399674-17399710(-) | bmo-mir-2855|nscaf2912:142836-142872(-) | 0.71 | |
n-a|chrX:21520309-21520371(+) | bmo-mir-993a|nscaf2853:2425130-2425192(+) | 0.81 | |
RNAz Sequence UACAGUAGGCACAGAAUCCCACUGUCAU__________UUUUUAUAAUAGUGGGAUUCUGUGCCUAUUGUA_G RNAz Consensus SS ......................................................................... CMfinder Sequence UACAGUAGGCACAGAAUCCCACUGCCAUUUUUUAUAAUAGUGGGAUUCUGUGCCUAUUGUA CMfinder Consensus SS :<<<<<<<<<<<<<<<<<<<<<<<<___________>>>>>>>>>>>>>>>>>>>>>>>>: | |||
n-a|chr10:20700474-20700560(+) | ppt-MIR1034|scaffold_202:211339-211420(-) | 0.70 | |
n-a|chr19:18794505-18794564(+) | hsa-mir-522|chr19:54254479-54254539(+) | 0.74 | |
n-a|chr8:22465672-22465711(-) | ame-mir-3763|GroupUn.1127:12726-12763(+) | 0.81 | |
n-a|chr2:15369889-15369920(+) | osa-MIR439j|chr10:15738111-15738142(-) | 0.75 | |
n-a|chr22:18907218-18907245(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.85 | |
n-a|chr12:21671602-21671660(+) | bmo-mir-2796|nscaf2962:167783-167841(+) | 0.80 | |
n-a|chr2:21504972-21505057(-) | ppt-MIR2084|scaffold_3:3110270-3110339(+) | 0.73 | |
n-a|chr6:16129316-16129346(+) | osa-MIR164e|chr03:10541166-10541196(+) | 0.71 | |
n-a|chr18:22006292-22006375(-) | bmo-mir-2807a-1|nscaf2990:99000-99075(-) | 0.71 | |
n-a|chr19:16435634-16435683(+) | mmu-mir-374c|chrX:103573085-103573133(+) | 0.76 | |
n-a|chr2:20648572-20648618(+) | bmo-mir-2849-2|nscaf2901:1007827-1007870(+) | 0.71 | |
n-a|chr2:24163214-24163287(-) | ame-mir-87-1|Group13.15:479010-479081(-) | 0.72 | |
n-a|chr17:25805483-25805510(-) | osa-MIR5162|chr12:16418640-16418668(+) | 0.80 | |
n-a|chr17:22028770-22028834(+) | cel-mir-355|II:11833495-11833556(-) | 0.76 | |
n-a|chr17:19412018-19412066(+) | bmo-mir-9d|nscaf2176:353056-353103(-) | 0.86 | |
n-a|chr6:21686029-21686089(+) | hsa-mir-1913|chr6:166922853-166922912(-) | 0.88 | |
RNAz Sequence CACUCACCUCCUGCUCUGUGGCCUGUUAGGAAUCGGGCCACACAGCAGAGGGUGAGCAGC RNAz Consensus SS ..(((((((.(((((.(((((((((........))))))))).))))).))))))).... CMfinder Sequence CUCACUUCCUGUUCUGUGGCCUGUUAGGAAUCGGGCCACACAGCAGAGGGUGAG CMfinder Consensus SS <<<<<<--<<<<<<<<<<<<<<<________>>>>>>>>>>>>>>>-->>>>>> | |||
n-a|chrX:24096463-24096525(+) | mmu-mir-3104|chr7:141992180-141992241(+) | 0.83 | |
n-a|chr4:21466321-21466382(-) | hsa-mir-664b|chrX:153996871-153996931(+) | 0.82 | |
n-a|chr16:15024681-15024737(+) | hsa-mir-3130-2|chr2:207647967-207648022(+) | 0.75 | |
n-a|chr9:16705053-16705101(-) | ath-MIR5656|chr1:1727361-1727408(+) | 0.77 | |
n-a|chrX:20081146-20081183(-) | ppt-MIR1051|scaffold_56:1824653-1824690(+) | 0.76 | |
n-a|chr5:17353808-17353872(-) | ppt-MIR166i|scaffold_127:459143-459211(+) | 0.75 | |
n-a|chr16:16423166-16423222(+) | hsa-mir-3130-2|chr2:207647967-207648022(+) | 0.75 | |
n-a|chrX:15510171-15510230(-) | cbr-mir-51|chrIV:5734749-5734809(+) | 0.89 | |
RNAz Sequence CAUCUGUCAGCCUCACUGGUAGCACCCAUGAGGUAGUUGCUACCAAUGAGGCUGACAGA RNAz Consensus SS ..(((((((((((...((.(((((.((....))....))))).))...))))))))))) CMfinder Sequence CUGUCAGCCUCACUGGUAGCACCCAUGAGGUAGUUGCUACCAAUGAGGCUGACAG CMfinder Consensus SS <<<<<<<<<<<<-<<<<<<<<-<<____>>---->>>>>>>>->>>>>>>>>>>> | |||
n-a|chr20:17946512-17946548(+) | hsa-mir-548ac|chr1:117102649-117102719(-) | 0.73 | |
n-a|chr5:17156037-17156102(-) | hsa-mir-616|chr12:57912958-57913023(-) | 0.74 | |
n-a|chr7:26231465-26231505(-) | ath-MIR831|chr2:10247369-10247411(+) | 0.72 | |
n-a|chr5:17304667-17304736(-) | mmu-mir-669j|chr2:10477940-10478010(+) | 0.70 | |
RNAz Sequence GAACGGUGUGCAUGAAAAUUCCAG_CAUAAAGACAGAAACAUAACUGGAA_UUUCAUGCACACCGUUCUGA RNAz Consensus SS (((((((((((((((((.((((((....................)))))).)))))))))))))))))... CMfinder Sequence CGGUGUGCAUGAAAAUUCCAGCAUAAAGACAGAAACAUAACUGGAA-UUUCAUGCACACUGUU CMfinder Consensus SS <<<<<<<<<<<<<<<<<<<<<___________________>>>>>>>>>>>>>>>>>>>>>:: | |||
n-a|chr14:24563362-24563418(+) | ame-mir-9b|Group15.33:20342-20400(-) | 0.77 | |
n-a|chr20:17950661-17950695(+) | bmo-mir-2775b|nscaf2883:1275550-1275585(-) | 0.79 | |
n-a|chr12:14935725-14935777(-) | bmo-mir-2822-1|nscaf1690:3605487-3605539(-) | 0.73 | |
n-a|chr16:18473206-18473262(-) | hsa-mir-3130-2|chr2:207647967-207648022(+) | 0.75 | |
n-a|chr7:14665920-14665980(-) | bfl-mir-124|Bf_V2_32:1879934-1879995(+) | 0.79 | |
n-a|chr6:24650873-24650929(-) | bmo-mir-2b|nscaf1690:7673859-7673918(-) | 0.73 | |
n-a|chr8:18067633-18067671(+) | ppt-MIR1030f|scaffold_435:112787-112823(-) | 0.73 | |
n-a|chr9:21536235-21536291(-) | ppt-MIR1055|scaffold_391:252837-252876(-) | 0.70 | |
n-a|chr15:25278804-25278926(+) | bmo-mir-3384|nscaf1690:1480845-1480966(-) | 0.80 | |
n-a|chr17:16875399-16875428(-) | bmo-mir-2813-2|nscaf2838:20617-20643(+) | 0.76 | |
n-a|chr1:23636298-23636366(-) | cel-mir-355|II:11833495-11833556(-) | 0.70 | |
n-a|chr11:15997795-15997839(+) | bmo-mir-9d|nscaf2176:353056-353103(-) | 0.73 | |
n-a|chr16:22432237-22432265(-) | osa-MIR2872|chr11:2520915-2520944(+) | 0.75 |