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Additional file 1: (A) Comparison of different blastn parameter allocations in the PigEST-cow alignments and (B) additional tables and figures reporting further results of the pipeline applied on the PigEST data.

Additional file 2: Conreads with at least two reads presented in at least 10 cDNA libraries.

EST2ncRNA framework: The Perl source code of the pipeline being applied in this project.