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ncRNAs
RNA families
Top Candidates
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Database search
Select a PigEST conread:
Conread name
Conread identifier
Select a PigEST conread type:
Contig & Singleton
or Contig
or Singleton
Select non-protein coding RNA type:
all
or (trans-acting) ncRNA
or cis-acting RNA
Select criteria of predicted RNA structures:
min. RNAz p-value (0.5 &le p &le 1)
max. RNAz z-score (-10 < z < 1.4)
Select criteria of predicted microRNAs:
min. RNAmicro p-value (0.5 &le p &le 1)
Select expression library(ies):
(multiple selections are OR linked)
Amnion (amn)
Aorta (aor)
Bladder (bla)
Bone marrow F115 (nbm)
Brain (cbe)
Brain (fco)
Brain (hyp)
Brain (pgl)
Brain F50 (ecc)
Brain F50 (ece)
Brain F100-107 (fce)
Brain F100-107 (fcc)
Brain F100-107 (fhi)
Cartilage (jca)
Cartilage F115 (nca)
Eye F50 (ret)
Eye (eye)
Fat (fat)
Heart (che)
Heart (hea)
Heart (hlv)
Intestine (cje)
Intestine (col)
Intestine (duo)
Intestine (ill)
Intestine (jej)
Intestine (lin)
Intestine (sin)
Intestine F50 (eje)
Intestine F115 (nco)
Intestine F115 (nje)
Kidney (cki)
Kidney (kid)
Liver (cli)
Liver (liv)
Liver F50 (eli)
Liver F100-107 (fli)
Lung (clu)
Lung (lun)
Lung F50 (elu)
Lung F115 (nlu)
Lymphatic gland (cly)
Lymphatic gland (lyg)
Lymphatic gland (lnt)
Mammary gland(cga)
Mammary gland(mcp)
Mammary gland(mga)
Mammary gland(mgp)
Mammary gland(mgm)
Mediastinum (med)
Muscles (bfe)
Muscles (isp)
Muscles (ldo)
Muscles (mas)
Muscles (sme)
Muscles (ssp)
Muscles (ste)
Muscles (tbr)
Muscles (vin)
Muscles F50 (ese)
Muscles F115 (nms)
Muscles (ctl)
Oesophagus (gul)
Ovary (ova)
Ovary (cov)
Placenta (pla)
Prostata (pro)
Rectum (rec)
Rhinal mucosal membrane (cmu)
Rhinal mucosal membrane F115 (nmm)
Salivary gland (sag)
Skin (csk)
Skin (ski)
Skin (ton)
Skin F50 (eep)
Skin F50 (eru)
Skin F115 (nep)
Spinal cord (spc)
Spinal cord F50 (ebs)
Spinal cord F100-107 (fbs)
Spleen (spl)
Spleen (csp)
Stomach (cst)
Stomach (sto)
Suprarenal glands(sug)
Suprarenal glands(cag)
Testicle (cte)
Testicle (tes)
Thyroid glands (cty)
Thyroid glands (thg)
Thyroid glands (pty)
Thyroid glands F100-107 (fty)
Trachea (tra)
Uterus (ute)
Uterus (cut)
Blood (cbl)
Bad brain (cbr)
Bad pancreas (pan)
Select similar sequence:
organism
Cow (bosTau2)
Human (hg17)
Chimp (panTro1)
Dog (canFam2)
Macaque (rheMac2)
Mouse (mm7)
Rat (rn3)
Elephant (loxAfr1)
Rabbit (oryCun1)
Tenrec (echTel1)
Armadillo (dasNov1)
Opossum (monDom2)
Chicken (galGal2)
Frog (xenTro1)
Zebrafish (danRer3)
Fugu (fr1)
Tetraodon (tetNig1)
position
(fe. chr13 or chr13:45,000,000-46,000,000)