Non-Coding RNA Search

4cip-UMC-p4civp1-013-a03

Sequence:


               
               GTGCTACAGGAATGGTCAAGAGCAATCAGTGGGGGAATTGCAAAGAAGAGAAGTCCGCAT
GGAATGATTCGCTAAAGAACAAACAGGGATGGGGTGATGGACAAAAATCAAACCAAGGGT
GGTCCGTTTCTGCCGGTGATAACTGGGGAGAAACTTCAAGGAGCAACCATTGGGGTGAGG
CTAATAAGAAATCTAGCTCAGGAGGTAGTGACAGTGACAGGTCCGTTTCTGGTTGGAATG
AACTTGGTAAAACTAGCTCTTTTACTTGGGGAAATAACATAAATCCCAATAATTCATCAG
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCTACAGGAATGGTCAAGAGCAATCAGTGGGGGAATTGCAAAGAAGAGAAGTCCGCAT
GGAATGATTCGCTAAAGAACAAACAGGGATGGGGTGATGGACAAAAATCAAACCAAGGGT
GGTCCGTTTCTGCCGGTGATAACTGGGGAGAAACTTCAAGGAGCAACCATTGGGGTGAGG
CTAATAAGAAATCTAGCTCAGGAGGTAGTGACAGTGACAGGTCCGTTTCTGGTTGGAATG
AACTTGGTAAAACTAGCTCTTTTACTTGGGGAAATAACATAAATCCCAATAATTCATCAG
G

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               70-189, + strand, RNAz p=0.930924

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               70-189, + strand, RNAz p=0.930924

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-301, gnl|bosTau2|chr25 (22619960-22619696)
               

               
               31-301, gnl|Hg17|chr16 (24709920-24710190)
               

               
               31-301, gnl|Mm7|chr7 (119274065-119274335)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-301, gnl|bosTau2|chr25 (22619960-22619696)
               

               
               31-301, gnl|Hg17|chr16 (24709920-24710190)
               

               
               31-301, gnl|Mm7|chr7 (119274065-119274335)

	31-301, gnl\|bosTau2\|chr25 (22619960-22619696)
	31-301, gnl\|Hg17\|chr16 (24709920-24710190)
	31-301, gnl\|Mm7\|chr7 (119274065-119274335)