Non-Coding RNA Search

4civ-UMC-p4civv1-001-d09

Sequence:


               
               GGCTGATCTTTGGGTCTTATAGGGTAAGGGCCATGACCTCATGGGGAGGCAAGGCATTGG
GAGAGGAAAAAACCTTTGATGTGTGTAGACCCTGAACTTTTTCTTTCTTGCCAACTTATT
TCTCAAACATTGGAAAACAGATATCAAGGTCCTATAAAAGATAGCATTTCATTAAAATGC
AGGAGGCCAGGCTTGATGAGGCAATGTAGGGGCTGAATTGGACTGAGAGAGGTTCCCATT
CAGGTCAGTTTAAAAGCAAAAGCCTCTgggacttccctggtgatccagtggttaggccac
tgcactttcacggcaggggacacgggttcaattcctgatctgggaaCTGGGATCCTGCAA
GCCCCATGGTGCAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGATCTTTGGGTCTTATAGGGTAAGGGCCATGACCTCATGGGGAGGCAAGGCATTGG
GAGAGGAAAAAACCTTTGATGTGTGTAGACCCTGAACTTTTTCTTTCTTGCCAACTTATT
TCTCAAACATTGGAAAACAGATATCAAGGTCCTATAAAAGATAGCATTTCATTAAAATGC
AGGAGGCCAGGCTTGATGAGGCAATGTAGGGGCTGAATTGGACTGAGAGAGGTTCCCATT
CAGGTCAGTTTAAAAGCAAAAGCCTCTgggacttccctggtgatccagtggttaggccac
tgcactttcacggcaggggacacgggttcaattcctgatctgggaaCTGGGATCCTGCAA
GCCCCATGGTGCAGTC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               274-346, tRNA Pseudo : RF00005;tRNA; (AC149694.2/172865-172936), RaveNnA 
Score=32.18

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               274-346, tRNA Pseudo : RF00005;tRNA; (AC149694.2/172865-172936), RaveNnA 
Score=32.18