Non-Coding RNA Search

4civ-UMC-p4civv1-008-d12

Sequence:


               
               GGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCATCTGAATCCAGGTACCACGTGGCT
TCGTCCATGCGGGACCTTCTCCTCCCGTTCTGGGCTTCTCCAGGCTTGGGGGAACTGGGA
CCCCAGGCCCAGTATGCTCGCCGCTCTCCATTGCTCGAGTCCTCCAGACGCCGTGGGGAC
TGTCGGCCCCATGCCTGGCCTTGTTCTGCAGGCTCCAATTGGATGGCCCGGAACCTGGGG
AAGGTGGGCGAGTCGCCGGCCCCAACCTCGAAGACGTTTCTCCTCCTGTCCAGGCCGGGG
GAGGCCTGCACGGTGATGCGGTGTTTGAAGTCCAGCGGCATGCTGATACGCTCGCCGCCG
TCGCGCGCGCGGAGTTTGCTGCGCTTGAAGGTACCGCGGCGGCGGCGGACGTGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGGTGTGGAAGGAGATCCTAAGGGGGATGAGTCATCTGAATCCAGGTACCACGTGGCT
TCGTCCATGCGGGACCTTCTCCTCCCGTTCTGGGCTTCTCCAGGCTTGGGGGAACTGGGA
CCCCAGGCCCAGTATGCTCGCCGCTCTCCATTGCTCGAGTCCTCCAGACGCCGTGGGGAC
TGTCGGCCCCATGCCTGGCCTTGTTCTGCAGGCTCCAATTGGATGGCCCGGAACCTGGGG
AAGGTGGGCGAGTCGCCGGCCCCAACCTCGAAGACGTTTCTCCTCCTGTCCAGGCCGGGG
GAGGCCTGCACGGTGATGCGGTGTTTGAAGTCCAGCGGCATGCTGATACGCTCGCCGCCG
TCGCGCGCGCGGAGTTTGCTGCGCTTGAAGGTACCGCGGCGGCGGCGGACGTGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               78-196, + strand, RNAz p=0.950167

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               78-196, + strand, RNAz p=0.950167

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               78-226, gnl|bosTau2|chr29 (37847718-37847570)
               

               
               78-226, gnl|Hg17|chr11 (65129989-65130132)
               

               
               78-226, gnl|Mm7|chr19 (5592289-5592146)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-226, gnl|bosTau2|chr29 (37847718-37847570)
               

               
               78-226, gnl|Hg17|chr11 (65129989-65130132)
               

               
               78-226, gnl|Mm7|chr19 (5592289-5592146)

	78-226, gnl\|bosTau2\|chr29 (37847718-37847570)
	78-226, gnl\|Hg17\|chr11 (65129989-65130132)
	78-226, gnl\|Mm7\|chr19 (5592289-5592146)