Non-Coding RNA Search

Blo1-PBL010024D04

Sequence:


               
               CTATGGAATCCAGACTCAAGATTCCCTGCATAAAATTCTCAAAAGGGGGGAAAAGAAGTA
ATCATTCCAAAATTATAGAAGACTCAGACTGCAGCATTAAAGTCCAGGAAGAGGCTGAAA
GTTTGGATATAAAAACTCCAGTCCAGTTGGATGACCAGGCAACAAAAACCAAGTCAACTC
TGGATATAAGGGAAGATGTCTCACAGAAAGATGGTGATGAGGTCTGTGAATCAAATGTGA
ACAAGAGCATAACTTCTCCTGGAGAAAAAGTGATTTCAGTAGAACTTGAGTTAGGTACGG
GGCATTCTGCTATTCCAACCGGAACGCTAATCCTTGAAAAAGATATTGAAACGACTGAAG
AAAAACCAAGCATTCATCCTCAGCAAGGGAGCCCACTGGAAACCTCAGACATAGAACATA
CCCTCCCAGTGGTTTCTGATGTTCCTCCCTTACCTGCAGTCCCAGATCAACAAATTGTGG
AAGAAGCCAGAAGCAGTATCCTATAAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATGGAATCCAGACTCAAGATTCCCTGCATAAAATTCTCAAAAGGGGGGAAAAGAAGTA
ATCATTCCAAAATTATAGAAGACTCAGACTGCAGCATTAAAGTCCAGGAAGAGGCTGAAA
GTTTGGATATAAAAACTCCAGTCCAGTTGGATGACCAGGCAACAAAAACCAAGTCAACTC
TGGATATAAGGGAAGATGTCTCACAGAAAGATGGTGATGAGGTCTGTGAATCAAATGTGA
ACAAGAGCATAACTTCTCCTGGAGAAAAAGTGATTTCAGTAGAACTTGAGTTAGGTACGG
GGCATTCTGCTATTCCAACCGGAACGCTAATCCTTGAAAAAGATATTGAAACGACTGAAG
AAAAACCAAGCATTCATCCTCAGCAAGGGAGCCCACTGGAAACCTCAGACATAGAACATA
CCCTCCCAGTGGTTTCTGATGTTCCTCCCTTACCTGCAGTCCCAGATCAACAAATTGTGG
AAGAAGCCAGAAGCAGTATCCTATAAAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34785357|gb|AAH57229.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34785357|gb|AAH57229.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               126-245, - strand, RNAz p=0.706968

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               126-245, - strand, RNAz p=0.706968

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-509, gnl|bosTau2|chr10 (51636916-51636417)
               

               
               7-509, gnl|Hg17|chr14 (64005230-64005726)
               

               
               7-509, gnl|Mm7|chr12 (74286349-74286845)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-509, gnl|bosTau2|chr10 (51636916-51636417)
               

               
               7-509, gnl|Hg17|chr14 (64005230-64005726)
               

               
               7-509, gnl|Mm7|chr12 (74286349-74286845)

	7-509, gnl\|bosTau2\|chr10 (51636916-51636417)
	7-509, gnl\|Hg17\|chr14 (64005230-64005726)
	7-509, gnl\|Mm7\|chr12 (74286349-74286845)