Non-Coding RNA Search

Blo1-PBL010048H11

Sequence:


               
               TGCAAACCTTCTCAGGCAGCTATCTTCATGTGACTTTCATCTTGCTAACTTATTTAGAGT
AACATTACAGCAGCTACGGAGTAAACAGTATGGTAAAGGAAAGAAACCATGGTAGCTTCA
GTTAAGGAGGGGAAATTTGAGGTGAATAATGTTAATAATACATTTTACACAAGCGTATGT
TCTATAGGAAAAAAAACTTAAAAATAATTTGTCATTGATGGACAGACAAGCCAGCCACGT
TATCTTCCCTACCTTATTTTTTTTTAATCTGTACATAGTTTAATTGGCTTTTTATCTGCC
TTATCTTACAGTGTGGGAATATGGATGACTCTGTTCTTCAGTGCTTTTTGTCTCTGCTAA
GCTGTCTCAACAACCTCTTCCTCTTACTTAAGGTTATTTTCTAATATCTAGCTCCCTTTC
TTTGAGTTACTTTACTGTTTTCTTTATTTAAAAACTACACTATTCTTTGCGTTTATCTGA
GTATCTTTATTTGGAATGACATATACAATATAAACATTTTTTTTCTTCCTGCTTGCTCAA
ATATCTTTCTGCTGTCTCACTGCCTGTTTGAATCTAATGCCAAAAGCCAGTAGGTTGGTC
CTGAGTAACCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCAAACCTTCTCAGGCAGCTATCTTCATGTGACTTTCATCTTGCTAACTTATTTAGAGT
AACATTACAGCAGCTACGGAGTAAACAGTATGGTAAAGGAAAGAAACCATGGTAGCTTCA
GTTAAGGAGGGGAAATTTGAGGTGAATAATGTTAATAATACATTTTACACAAGCGTATGT
TCTATAGGAAAAAAAACTTAAAAATAATTTGTCATTGATGGACAGACAAGCCAGCCACGT
TATCTTCCCTACCTTATTTTTTTTTAATCTGTACATAGTTTAATTGGCTTTTTATCTGCC
TTATCTTACAGTGTGGGAATATGGATGACTCTGTTCTTCAGTGCTTTTTGTCTCTGCTAA
GCTGTCTCAACAACCTCTTCCTCTTACTTAAGGTTATTTTCTAATATCTAGCTCCCTTTC
TTTGAGTTACTTTACTGTTTTCTTTATTTAAAAACTACACTATTCTTTGCGTTTATCTGA
GTATCTTTATTTGGAATGACATATACAATATAAACATTTTTTTTCTTCCTGCTTGCTCAA
ATATCTTTCTGCTGTCTCACTGCCTGTTTGAATCTAATGCCAAAAGCCAGTAGGTTGGTC
CTGAGTAACCTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               338-457, - strand, RNAz p=0.868626

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               338-457, - strand, RNAz p=0.868626

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-606, gnl|bosTau2|chr11 (56201110-56201694)
               

               
               23-606, gnl|Hg17|chr2 (24419976-24419064)
               

               
               23-606, gnl|Mm7|chr12 (4572950-4573520)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-606, gnl|bosTau2|chr11 (56201110-56201694)
               

               
               23-606, gnl|Hg17|chr2 (24419976-24419064)
               

               
               23-606, gnl|Mm7|chr12 (4572950-4573520)

	23-606, gnl\|bosTau2\|chr11 (56201110-56201694)
	23-606, gnl\|Hg17\|chr2 (24419976-24419064)
	23-606, gnl\|Mm7\|chr12 (4572950-4573520)