Non-Coding RNA Search

Blo2-AR026B04PBC30IB04S

Sequence:


               
               CCCAGCTTTGAGCNNNTAAATAAAGTATCAAGCATGGTTCCTGCCTTTGGTAACTTTGAA
TCTAGTGGGGAAAAAAGATCTAGCAAGCATGTAATCCAGATATAAATAATAGATCATTAT
AGGGAAGTTTTAAAATGAGAAAAGCACAGCTATACTGGGGGCTGGTGTAGCTAGGGAGAG
TTTCCAGGAAAACACACTTCTGTCTATGTGATCTGGATTTCTAGAAGAGGGGCATGATTA
GGGTTGATTTAAGGGTTCAACAGATTCTCTTAAATATGATTTGTCACCAAATCATATATA
TATATTATTGCATTTCAGCCAGCTTTATGATACATAATAAAATTAAATTACGATAAAGTA
ATATATGCTAGANNATNNA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAGCTTTGAGCNNNTAAATAAAGTATCAAGCATGGTTCCTGCCTTTGGTAACTTTGAA
TCTAGTGGGGAAAAAAGATCTAGCAAGCATGTAATCCAGATATAAATAATAGATCATTAT
AGGGAAGTTTTAAAATGAGAAAAGCACAGCTATACTGGGGGCTGGTGTAGCTAGGGAGAG
TTTCCAGGAAAACACACTTCTGTCTATGTGATCTGGATTTCTAGAAGAGGGGCATGATTA
GGGTTGATTTAAGGGTTCAACAGATTCTCTTAAATATGATTTGTCACCAAATCATATATA
TATATTATTGCATTTCAGCCAGCTTTATGATACATAATAAAATTAAATTACGATAAAGTA
ATATATGCTAGANNATNNA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               148-264, + strand, RNAz p=0.921669

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               148-264, + strand, RNAz p=0.921669

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-379, gnl|bosTau2|chrX (29404626-29405022)
               

               
               3-379, gnl|Hg17|chrX (43298439-43298850)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-379, gnl|bosTau2|chrX (29404626-29405022)
               

               
               3-379, gnl|Hg17|chrX (43298439-43298850)

	3-379, gnl\|bosTau2\|chrX (29404626-29405022)
	3-379, gnl\|Hg17\|chrX (43298439-43298850)