Blo2-AR038C06PBC30AC06R
|
acgccaagctctaatacgactcactatagggaaagctggtacgcctgcaggtaccggtcc
ggaattcccgggtcgacCCACGCGTCCGCGGACGCGTGGGTAAGGAAAAGCTTTGCCAGC
AGAAGTATAATGTCTCCTGCATAATGATCATGCCTCNNNACCAANNNCAAGGATTTGGAC
GGNNTCTCATTGATTTCAGCTATTTGCTTTCTAGAAGAGAAGGCCAAGCAGGGTCTCCTG
AAAAGCCACTCTCNGACCTGGGCCGTCTCNNNTACCTGGCCTATTGGAAGAGTGTCATCT
TAGAATATCTCNACCACCACCATGAGAGGCACATCAGCATCAAGGCCATCAGCAGAGCTA
CGGGCATGTGCCCCCATGACA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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acgccaagctctaatacgactcactatagggaaagctggtacgcctgcaggtaccggtcc
ggaattcccgggtcgacCCACGCGTCCGCGGACGCGTGGGTAAGGAAAAGCTTTGCCAGC
AGAAGTATAATGTCTCCTGCATAATGATCATGCCTCNNNACCAANNNCAAGGATTTGGAC
GGNNTCTCATTGATTTCAGCTATTTGCTTTCTAGAAGAGAAGGCCAAGCAGGGTCTCCTG
AAAAGCCACTCTCNGACCTGGGCCGTCTCNNNTACCTGGCCTATTGGAAGAGTGTCATCT
TAGAATATCTCNACCACCACCATGAGAGGCACATCAGCATCAAGGCCATCAGCAGAGCTA
CGGGCATGTGCCCCCATGACA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
199-381, gnl|bosTau2|chr28 (24106667-24106485) |
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199-381, gnl|canFam2|chr4 (28501708-28501914) |
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199-381, gnl|danRer3|chr13 (27914645-27914438) |
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199-381, gnl|dasNov1|scaffold_58375 (39317-39523) |
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199-381, gnl|echTel1|scaffold_311458 (36514-36720) |
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199-381, gnl|fr1|chrUn (62758448-62758250) |
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199-381, gnl|galGal2|chr6 (14247687-14247481) |
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199-381, gnl|hg17|chr10 (76450331-76450537) |
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199-381, gnl|Hg17|chr10 (76450346-76450528) |
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199-381, gnl|loxAfr1|scaffold_8177 (65959-66165) |
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199-381, gnl|mm7|chr14 (19319402-19319607) |
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199-381, gnl|Mm7|chr14 (19319416-19319598) |
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199-381, gnl|monDom2|scaffold_14 (3086976-3087182) |
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199-381, gnl|oryCun1|scaffold_190775 (8653-8447) |
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199-381, gnl|panTro1|chr8 (77707583-77707789) |
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199-381, gnl|rheMac2|chr9 (61987236-61987030) |
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199-381, gnl|rn3|chrX (96380774-96380976) |
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199-381, gnl|tetNig1|chr2_random (619760-619953) |
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199-381, gnl|xenTro1|scaffold_106 (490212-490417) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
199-381, gnl|bosTau2|chr28 (24106667-24106485) |
|
199-381, gnl|canFam2|chr4 (28501708-28501914) |
|
199-381, gnl|danRer3|chr13 (27914645-27914438) |
|
199-381, gnl|dasNov1|scaffold_58375 (39317-39523) |
|
199-381, gnl|echTel1|scaffold_311458 (36514-36720) |
|
199-381, gnl|fr1|chrUn (62758448-62758250) |
|
199-381, gnl|galGal2|chr6 (14247687-14247481) |
|
199-381, gnl|hg17|chr10 (76450331-76450537) |
|
199-381, gnl|Hg17|chr10 (76450346-76450528) |
|
199-381, gnl|loxAfr1|scaffold_8177 (65959-66165) |
|
199-381, gnl|mm7|chr14 (19319402-19319607) |
|
199-381, gnl|Mm7|chr14 (19319416-19319598) |
|
199-381, gnl|monDom2|scaffold_14 (3086976-3087182) |
|
199-381, gnl|oryCun1|scaffold_190775 (8653-8447) |
|
199-381, gnl|panTro1|chr8 (77707583-77707789) |
|
199-381, gnl|rheMac2|chr9 (61987236-61987030) |
|
199-381, gnl|rn3|chrX (96380774-96380976) |
|
199-381, gnl|tetNig1|chr2_random (619760-619953) |
|
199-381, gnl|xenTro1|scaffold_106 (490212-490417) |
