Non-Coding RNA Search

Blo2-AR042A09PBC30EA07S

Sequence:


               
               CACATATGTAAATACATAGCGCACCCTGGCTCGTTGGACGAAACCACTGGATAAATGACA
GTGCTGTAAGGAGAGAATTCAAGCTAGGAGGATGAACGCAGTGAATTCATTTTTATAGAG
TCATAGATCTCAAGTATAATAGCATCTTGGGAAATGAGTAAAAGCATTAATTAATTTGGC
AAATGACTGCTAAGAAAATTATGTGGAGATGCAGGTGTTACTGGCTTTGGTTTCTAGAGA
CTCACCGGTGATTATTTTCCATGACTTTTCTCCCCAGAATGCTAAAAAGAAAATGTATGG
CTGCACAGAAGCCTTCCTGGCTGATGCAAAGTGGATTTTGCACAACTGCATCATATATAA
TGGGGGTGAGTGATGCTGATGACTCTAAGAAAGNGNGGATGCTGTGTGTGTTGGCTATTC
TCNTGCNNNNCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACATATGTAAATACATAGCGCACCCTGGCTCGTTGGACGAAACCACTGGATAAATGACA
GTGCTGTAAGGAGAGAATTCAAGCTAGGAGGATGAACGCAGTGAATTCATTTTTATAGAG
TCATAGATCTCAAGTATAATAGCATCTTGGGAAATGAGTAAAAGCATTAATTAATTTGGC
AAATGACTGCTAAGAAAATTATGTGGAGATGCAGGTGTTACTGGCTTTGGTTTCTAGAGA
CTCACCGGTGATTATTTTCCATGACTTTTCTCCCCAGAATGCTAAAAAGAAAATGTATGG
CTGCACAGAAGCCTTCCTGGCTGATGCAAAGTGGATTTTGCACAACTGCATCATATATAA
TGGGGGTGAGTGATGCTGATGACTCTAAGAAAGNGNGGATGCTGTGTGTGTTGGCTATTC
TCNTGCNNNNCATTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               242-360, - strand, RNAz p=0.597443

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               242-360, - strand, RNAz p=0.597443

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-434, gnl|bosTau2|chr25 (1991933-1992366)
               

               
               4-434, gnl|Hg17|chr20 (45352738-45352269)
               

               
               4-434, gnl|Mm7|chr2 (165579814-165579399)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-434, gnl|bosTau2|chr25 (1991933-1992366)
               

               
               4-434, gnl|Hg17|chr20 (45352738-45352269)
               

               
               4-434, gnl|Mm7|chr2 (165579814-165579399)

	4-434, gnl\|bosTau2\|chr25 (1991933-1992366)
	4-434, gnl\|Hg17\|chr20 (45352738-45352269)
	4-434, gnl\|Mm7\|chr2 (165579814-165579399)