Bra1-olf_061_B04
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AGACCATCCTGCGCATGCTGGACANCGACTCCATCCTGGTGGACGCCNTCCGCAAGATCA
AGGACNACGGTGGAGTACTACGTNGACTCGTCCCAGGACCCCNACTTCNAGGAGAACGAG
TTCCTCTACGACGACCTGGACCTNGAGGACATTNCACAGGCGCTGGTCGCCACCTCCCCA
CCCAGCCACAGTCACATGGAGGATGAGATCTTCAACCAGTCAAGCAGTACGCCCACCTNC
ACCACCTCCAGCTNGCCCATCCCACCCAGCCCGGCCAACTGCACCACGGAAAACTCTGAA
GATGACAAGAAGAGGGGACGCTCGACGGATAGTGAAGTCAGCCAGTCTCCAGCCAAAAAC
GGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCCGTGCCGCCAAGCTAC
CCCTNCGGCCCCCCGCCTACCGGCTCTGCCCTGAGCACCACCCCTGGCAACAATGGGGCC
CCTGCCCCAGCAGCACCCGCAAGTGCCCTGGGCCCCAAGGCCAGCCCAGCTCCCAGCCAC
AACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCGCCAGCCCCTANTGGGCCC
AGCACCGTCCAGCCACGACCCCCCA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGACCATCCTGCGCATGCTGGACANCGACTCCATCCTGGTGGACGCCNTCCGCAAGATCA
AGGACNACGGTGGAGTACTACGTNGACTCGTCCCAGGACCCCNACTTCNAGGAGAACGAG
TTCCTCTACGACGACCTGGACCTNGAGGACATTNCACAGGCGCTGGTCGCCACCTCCCCA
CCCAGCCACAGTCACATGGAGGATGAGATCTTCAACCAGTCAAGCAGTACGCCCACCTNC
ACCACCTCCAGCTNGCCCATCCCACCCAGCCCGGCCAACTGCACCACGGAAAACTCTGAA
GATGACAAGAAGAGGGGACGCTCGACGGATAGTGAAGTCAGCCAGTCTCCAGCCAAAAAC
GGCTCCAAGCCTGTCCACAGCAACCAGCACCCTCAGTCCCCAGCCGTGCCGCCAAGCTAC
CCCTNCGGCCCCCCGCCTACCGGCTCTGCCCTGAGCACCACCCCTGGCAACAATGGGGCC
CCTGCCCCAGCAGCACCCGCAAGTGCCCTGGGCCCCAAGGCCAGCCCAGCTCCCAGCCAC
AACTCGGGCACCCCTGCCCCCTATGCCCAGGCTGTGGCCCCGCCAGCCCCTANTGGGCCC
AGCACCGTCCAGCCACGACCCCCCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
463-616, - strand, RNAmicro p=0.996847 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
463-616, - strand, RNAmicro p=0.996847 |
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1-153, gnl|bosTau2|chr18 (56093041-56093192) |
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1-153, gnl|Hg17|chr19 (59341213-59341364) |
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1-153, gnl|Mm7|chr7 (3276226-3276377) |
| |
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155-289, gnl|bosTau2|chr18 (56093273-56093407) |
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155-289, gnl|canFam2|chr1 (106140060-106139918) |
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155-289, gnl|danRer3|chr19 (4382023-4382160) |
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155-289, gnl|echTel1|scaffold_284539 (35541-35684) |
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155-289, gnl|fr1|chrUn (200912823-200912965) |
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155-289, gnl|hg17|chr19 (59341454-59341597) |
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155-289, gnl|Hg17|chr19 (59341458-59341592) |
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155-289, gnl|loxAfr1|scaffold_122572 (4237-4380) |
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155-289, gnl|mm7|chr7 (3276466-3276609) |
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155-289, gnl|Mm7|chr7 (3276470-3276604) |
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155-289, gnl|monDom2|scaffold_191 (1314261-1314118) |
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155-289, gnl|oryCun1|scaffold_160673 (9319-9176) |
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155-289, gnl|panTro1|chr20 (56784302-56784445) |
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155-289, gnl|rheMac2|chr19 (60247371-60247514) |
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155-289, gnl|rn3|chr1 (63953574-63953431) |
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155-289, gnl|tetNig1|chr8 (8533581-8533438) |
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155-289, gnl|xenTro1|scaffold_374 (175150-175293) |
| |
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343-625, gnl|bosTau2|chr18 (56095601-56095883) |
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343-625, gnl|Hg17|chr19 (59343692-59343974) |
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343-625, gnl|Mm7|chr7 (3278527-3278809) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-153, gnl|bosTau2|chr18 (56093041-56093192) |
|
1-153, gnl|Hg17|chr19 (59341213-59341364) |
|
1-153, gnl|Mm7|chr7 (3276226-3276377) |
| |
|
155-289, gnl|bosTau2|chr18 (56093273-56093407) |
|
155-289, gnl|canFam2|chr1 (106140060-106139918) |
|
155-289, gnl|danRer3|chr19 (4382023-4382160) |
|
155-289, gnl|echTel1|scaffold_284539 (35541-35684) |
|
155-289, gnl|fr1|chrUn (200912823-200912965) |
|
155-289, gnl|hg17|chr19 (59341454-59341597) |
|
155-289, gnl|Hg17|chr19 (59341458-59341592) |
|
155-289, gnl|loxAfr1|scaffold_122572 (4237-4380) |
|
155-289, gnl|mm7|chr7 (3276466-3276609) |
|
155-289, gnl|Mm7|chr7 (3276470-3276604) |
|
155-289, gnl|monDom2|scaffold_191 (1314261-1314118) |
|
155-289, gnl|oryCun1|scaffold_160673 (9319-9176) |
|
155-289, gnl|panTro1|chr20 (56784302-56784445) |
|
155-289, gnl|rheMac2|chr19 (60247371-60247514) |
|
155-289, gnl|rn3|chr1 (63953574-63953431) |
|
155-289, gnl|tetNig1|chr8 (8533581-8533438) |
|
155-289, gnl|xenTro1|scaffold_374 (175150-175293) |
| |
|
343-625, gnl|bosTau2|chr18 (56095601-56095883) |
|
343-625, gnl|Hg17|chr19 (59343692-59343974) |
|
343-625, gnl|Mm7|chr7 (3278527-3278809) |
