Bra1-olf_061_B07
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CGCTCCAGCAGGTCTGGGCTTAGATGCTGGACCAGCTGCAGAACTCCTCATTCTGTCTCA
CTTTCTAGCAGTGGGAAGGGTTTGGGCCAGGAGTGGGGAGGGCACTCCGACCCTCTCACT
GTTGGGCTTTGGCTCCTTCTGGACTCTGCCAGGCCAACCCCTACCCCAAGCAGTTGTTGA
CTTGTTGGAGACTTCTGGAGAGGAATGAGACAGCACCCTGGCCCCAGGCCAGCAGCTATA
CCTACCAACCCAGGCCTCCCATAGTCAAGGACGTACTTCCTGCTCCTCCATCCAACTTCC
TGCCCCTCAGCCTTCTCCTCTTCCATTAACGCTTTAGCATCTAAGCCTCCATGCTTAAAA
GCCAGGACAGGAGCAAAATAGGAGAATTAGAGAGCTTACCCCCACCTGTGCCTCGGAAGA
GGGCATGGAAGTCTTGGCTTTTCCACTAGTGGGCAGGGGGTGGTCCCAAACATATCTGTG
CTCAGAGGCAAGCTCTCCCCCCACCCCCCACTCTGCTGAATCCGGTGGCGAGTGATGGCA
TGAGAACTGGCACCAACCCAGGGGCATGATGTCACACCCGCGCCAGCGTCTGCCCGCTGG
GCTCCGCGCCCAGCCTGGCTCTGGGGCCTCACTGCCCCGGCAGCCCCTTGTTCTGCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CGCTCCAGCAGGTCTGGGCTTAGATGCTGGACCAGCTGCAGAACTCCTCATTCTGTCTCA
CTTTCTAGCAGTGGGAAGGGTTTGGGCCAGGAGTGGGGAGGGCACTCCGACCCTCTCACT
GTTGGGCTTTGGCTCCTTCTGGACTCTGCCAGGCCAACCCCTACCCCAAGCAGTTGTTGA
CTTGTTGGAGACTTCTGGAGAGGAATGAGACAGCACCCTGGCCCCAGGCCAGCAGCTATA
CCTACCAACCCAGGCCTCCCATAGTCAAGGACGTACTTCCTGCTCCTCCATCCAACTTCC
TGCCCCTCAGCCTTCTCCTCTTCCATTAACGCTTTAGCATCTAAGCCTCCATGCTTAAAA
GCCAGGACAGGAGCAAAATAGGAGAATTAGAGAGCTTACCCCCACCTGTGCCTCGGAAGA
GGGCATGGAAGTCTTGGCTTTTCCACTAGTGGGCAGGGGGTGGTCCCAAACATATCTGTG
CTCAGAGGCAAGCTCTCCCCCCACCCCCCACTCTGCTGAATCCGGTGGCGAGTGATGGCA
TGAGAACTGGCACCAACCCAGGGGCATGATGTCACACCCGCGCCAGCGTCTGCCCGCTGG
GCTCCGCGCCCAGCCTGGCTCTGGGGCCTCACTGCCCCGGCAGCCCCTTGTTCTGCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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299-451, - strand, RNAmicro p=0.98796 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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299-451, - strand, RNAmicro p=0.98796 |
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539-657, AU296165 full-length enriched pig cDNA library, main and accessory
(dbj|AU296165.1|), blast E-value=0, identity=100% |
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539-617, DA112518 BRACE3 Homo sapiens cDNA clone BRACE3030428 5', mRNA
(dbj|DA112518.1|), blast E-value=9e-24, identity=93.67% |
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539-617, DA313702 BRHIP3 Homo sapiens cDNA clone BRHIP3003320 5', mRNA
(dbj|DA313702.1|), blast E-value=9e-24, identity=93.67% |
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539-617, DA774812 OCBBF2 Homo sapiens cDNA clone OCBBF2008601 5', mRNA
(dbj|DA774812.1|), blast E-value=9e-24, identity=93.67% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
539-657, AU296165 full-length enriched pig cDNA library, main and accessory
(dbj|AU296165.1|), blast E-value=0, identity=100% |
|
539-617, DA112518 BRACE3 Homo sapiens cDNA clone BRACE3030428 5', mRNA
(dbj|DA112518.1|), blast E-value=9e-24, identity=93.67% |
|
539-617, DA313702 BRHIP3 Homo sapiens cDNA clone BRHIP3003320 5', mRNA
(dbj|DA313702.1|), blast E-value=9e-24, identity=93.67% |
|
539-617, DA774812 OCBBF2 Homo sapiens cDNA clone OCBBF2008601 5', mRNA
(dbj|DA774812.1|), blast E-value=9e-24, identity=93.67% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map