Non-Coding RNA Search

Bra1-olf_071_F05

Sequence:


               
               CACCACCCAGTCAGTGCTGTGTACAAGACGGNACGCCAGCCTCGGGGNACGTGCACCACC
ACGGCGACCACACAGGGCAGACCCACGGGCCCCCCACCCCGCCCACCACCCCCAAGACGG
ACCTGCACCACGGGGGCAAGCAGGAGCTGAAGCTGGAAGGCCGCCGACTGGTGGACAGCG
GCCGCCAGAACATCGACTTCAGCAACGTGGACATCTCGGAGCTGAGCAGCGAGGTCATCG
GGAACATGGACACCTTCGACGTGCATGAGTTCGACCAGTACCTGCCCCTCAACGGCCACT
CGGCCCTGCCCGCAGAGCCGGGCCAGCCCGCGGCCGCCGGCTCCTACGGGGGCACCTCCT
ACGCGCACGCTGGGGCGGCCGGCCTCGGGGCGTCCCCCGTGTGGGCCCCCAAGGGCGCCC
AGTCGGCCTCGGAGTCACCCACCGAGGCCGGCCCCCCGCGGCCGCACATCAAGACGGAGC
AGCTGAGCCCCAGCCACTACGGCGACCAGGCGCACGGCTCCCCGGGGCGCGCCGACTACG
CCTNCTACAGCGCCCAGGCCAGCGTGACCACGGNCGCCCCCGNCGNAGNCCGCTTCTTCT
TTACCAGCTTCGCAGTGCGACTACACCGACCTGCAGACCCCCAACTACTACAGNCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCACCCAGTCAGTGCTGTGTACAAGACGGNACGCCAGCCTCGGGGNACGTGCACCACC
ACGGCGACCACACAGGGCAGACCCACGGGCCCCCCACCCCGCCCACCACCCCCAAGACGG
ACCTGCACCACGGGGGCAAGCAGGAGCTGAAGCTGGAAGGCCGCCGACTGGTGGACAGCG
GCCGCCAGAACATCGACTTCAGCAACGTGGACATCTCGGAGCTGAGCAGCGAGGTCATCG
GGAACATGGACACCTTCGACGTGCATGAGTTCGACCAGTACCTGCCCCTCAACGGCCACT
CGGCCCTGCCCGCAGAGCCGGGCCAGCCCGCGGCCGCCGGCTCCTACGGGGGCACCTCCT
ACGCGCACGCTGGGGCGGCCGGCCTCGGGGCGTCCCCCGTGTGGGCCCCCAAGGGCGCCC
AGTCGGCCTCGGAGTCACCCACCGAGGCCGGCCCCCCGCGGCCGCACATCAAGACGGAGC
AGCTGAGCCCCAGCCACTACGGCGACCAGGCGCACGGCTCCCCGGGGCGCGCCGACTACG
CCTNCTACAGCGCCCAGGCCAGCGTGACCACGGNCGCCCCCGNCGNAGNCCGCTTCTTCT
TTACCAGCTTCGCAGTGCGACTACACCGACCTGCAGACCCCCAACTACTACAGNCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61819347|ref|XP_608786.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61819347|ref|XP_608786.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               223-342, - strand, RNAz p=0.908999

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               223-342, - strand, RNAz p=0.908999

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               73-656, gnl|bosTau2|chr25 (1007587-1007005)
               

               
               73-656, gnl|Hg17|chr16 (974699-975227)
               

               
               73-656, gnl|Mm7|chr17 (23750993-23750402)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-656, gnl|bosTau2|chr25 (1007587-1007005)
               

               
               73-656, gnl|Hg17|chr16 (974699-975227)
               

               
               73-656, gnl|Mm7|chr17 (23750993-23750402)

	73-656, gnl\|bosTau2\|chr25 (1007587-1007005)
	73-656, gnl\|Hg17\|chr16 (974699-975227)
	73-656, gnl\|Mm7\|chr17 (23750993-23750402)