Bra1-olf_081_A08
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACCTGCTCCGGCAGCGCCTCTTGTGGCAGCTCAACTCTGGCTTGTCTGGAATGCGTCCT CACACCGCTCAACCTTCCGTAAACTGGCTAAATGGAGGCTTGTCTCTAGCACGTGAAACT CTAAGCGTACTGAGTCTCTAGAACCCGAAGCCATGTACTTTACGAATATTTGGTGGGTGT TAGATTGGTCTCTGAAAAGAATGTCATAAAACAGCCAAAAATGTGTGTGTGGTGTTTAAT CCCTGACAGGCCAGTTGAGAGGTATGTATGTCGGACAAGAGTTGCTGGTCCCCCTCCAGC ACTCCCTTGGCCTGCTCTTGTCAATTACACTGATGGGACCAGAATCTCCAGTCTGTGGCC TGGCCGCCAGCCCACTCATGGAGCTCGGGGTTGAAGCGATGTAGCCCCCGGCTCCCAGGA ATTGTCCCACGTTGCTCCTCCCTCTAGACGATGCTGAGCCCTCCACAGAGACTCAGTGGA ATTGACAAACCGTGCTGGCTCCTTCTCTGTTCCTTAAAGCTCTCGGCTCCAGCCTCTCTG CCTNCCCGTCCTGGGTATCCCTGAATCCCTGGGTCCCCCTNCTTGGTTTTTGTCTCTCGA TGTCCTCCTGCACGGATGGGCCTGGGGTCTGGGCTCCCATCCTTGCCTTGTGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACCTGCTCCGGCAGCGCCTCTTGTGGCAGCTCAACTCTGGCTTGTCTGGAATGCGTCCT CACACCGCTCAACCTTCCGTAAACTGGCTAAATGGAGGCTTGTCTCTAGCACGTGAAACT CTAAGCGTACTGAGTCTCTAGAACCCGAAGCCATGTACTTTACGAATATTTGGTGGGTGT TAGATTGGTCTCTGAAAAGAATGTCATAAAACAGCCAAAAATGTGTGTGTGGTGTTTAAT CCCTGACAGGCCAGTTGAGAGGTATGTATGTCGGACAAGAGTTGCTGGTCCCCCTCCAGC ACTCCCTTGGCCTGCTCTTGTCAATTACACTGATGGGACCAGAATCTCCAGTCTGTGGCC TGGCCGCCAGCCCACTCATGGAGCTCGGGGTTGAAGCGATGTAGCCCCCGGCTCCCAGGA ATTGTCCCACGTTGCTCCTCCCTCTAGACGATGCTGAGCCCTCCACAGAGACTCAGTGGA ATTGACAAACCGTGCTGGCTCCTTCTCTGTTCCTTAAAGCTCTCGGCTCCAGCCTCTCTG CCTNCCCGTCCTGGGTATCCCTGAATCCCTGGGTCCCCCTNCTTGGTTTTTGTCTCTCGA TGTCCTCCTGCACGGATGGGCCTGGGGTCTGGGCTCCCATCCTTGCCTTGTGCA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 462-580, - strand, RNAz p=0.999691 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 462-580, - strand, RNAz p=0.999691 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 2-349, gnl|bosTau2|chr13 (44346717-44347068) | |
| 2-349, gnl|canFam2|chr24 (27996375-27997290) | |
| 2-349, gnl|echTel1|scaffold_310533 (11131-12116) | |
| 2-349, gnl|galGal2|chr20 (149802-150863) | |
| 2-349, gnl|hg17|chr20 (34259177-34260095) | |
| 2-349, gnl|Hg17|chr20 (34259821-34260188) | |
| 2-349, gnl|loxAfr1|scaffold_2441 (52761-53706) | |
| 2-349, gnl|mm7|chr2 (156264076-156265047) | |
| 2-349, gnl|Mm7|chr2 (156264704-156265118) | |
| 2-349, gnl|monDom2|scaffold_6 (10827844-10826895) | |
| 2-349, gnl|oryCun1|scaffold_211721 (15128-14232) | |
| 2-349, gnl|panTro1|chr21 (36487503-36488421) | |
| 2-349, gnl|rheMac2|chr10 (28312652-28311734) | |
| 2-349, gnl|rn3|chr3 (146829768-146830671) | |
| 372-653, gnl|bosTau2|chr13 (44347067-44347348) | |
| 372-653, gnl|canFam2|chr24 (27997291-27997574) | |
| 372-653, gnl|dasNov1|scaffold_24336 (55868-56148) | |
| 372-653, gnl|echTel1|scaffold_310533 (12117-12374) | |
| 372-653, gnl|galGal2|chr20 (150864-151146) | |
| 372-653, gnl|hg17|chr20 (34260096-34260394) | |
| 372-653, gnl|Hg17|chr20 (34260187-34260487) | |
| 372-653, gnl|loxAfr1|scaffold_2441 (53707-54008) | |
| 372-653, gnl|mm7|chr2 (156265048-156265322) | |
| 372-653, gnl|Mm7|chr2 (156265117-156265408) | |
| 372-653, gnl|monDom2|scaffold_6 (10826894-10826556) | |
| 372-653, gnl|oryCun1|scaffold_211721 (14231-13928) | |
| 372-653, gnl|panTro1|chr21 (36488422-36488720) | |
| 372-653, gnl|rheMac2|chr10 (28311733-28311435) | |
| 372-653, gnl|rn3|chr3 (146830672-146830947) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-349, gnl|bosTau2|chr13 (44346717-44347068) | |
| 2-349, gnl|canFam2|chr24 (27996375-27997290) | |
| 2-349, gnl|echTel1|scaffold_310533 (11131-12116) | |
| 2-349, gnl|galGal2|chr20 (149802-150863) | |
| 2-349, gnl|hg17|chr20 (34259177-34260095) | |
| 2-349, gnl|Hg17|chr20 (34259821-34260188) | |
| 2-349, gnl|loxAfr1|scaffold_2441 (52761-53706) | |
| 2-349, gnl|mm7|chr2 (156264076-156265047) | |
| 2-349, gnl|Mm7|chr2 (156264704-156265118) | |
| 2-349, gnl|monDom2|scaffold_6 (10827844-10826895) | |
| 2-349, gnl|oryCun1|scaffold_211721 (15128-14232) | |
| 2-349, gnl|panTro1|chr21 (36487503-36488421) | |
| 2-349, gnl|rheMac2|chr10 (28312652-28311734) | |
| 2-349, gnl|rn3|chr3 (146829768-146830671) | |
| 372-653, gnl|bosTau2|chr13 (44347067-44347348) | |
| 372-653, gnl|canFam2|chr24 (27997291-27997574) | |
| 372-653, gnl|dasNov1|scaffold_24336 (55868-56148) | |
| 372-653, gnl|echTel1|scaffold_310533 (12117-12374) | |
| 372-653, gnl|galGal2|chr20 (150864-151146) | |
| 372-653, gnl|hg17|chr20 (34260096-34260394) | |
| 372-653, gnl|Hg17|chr20 (34260187-34260487) | |
| 372-653, gnl|loxAfr1|scaffold_2441 (53707-54008) | |
| 372-653, gnl|mm7|chr2 (156265048-156265322) | |
| 372-653, gnl|Mm7|chr2 (156265117-156265408) | |
| 372-653, gnl|monDom2|scaffold_6 (10826894-10826556) | |
| 372-653, gnl|oryCun1|scaffold_211721 (14231-13928) | |
| 372-653, gnl|panTro1|chr21 (36488422-36488720) | |
| 372-653, gnl|rheMac2|chr10 (28311733-28311435) | |
| 372-653, gnl|rn3|chr3 (146830672-146830947) |