Bra1-olf_081_A09
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGNAGCCAGGTGTTTGGGTCCCTGGNANACGCCATCGGCCCCGGNANAGCAGTGGGGCTG CCGACCCTCCAGACCCCTCTCCAGCCCCATGGGAACCCTGAATTCCACCAGCCCCATCCA CCTCCAGACCCTCCAAGATGGACTGAGCCAGGCGGCTGGCCAGATGGACAAGCCGGATGC CAAGGCGACCACCACCCCTGAGGAAGCCCTGGCCTGTGCCTAGAGGAAGGGGCTGCCCAC CCCGACCCCGACCCCACCCAGCACCATGAATACCTCCGCCCCGCCCGCCGTCAGCCCCAA CATCACCGTCCTGGCCCCGGGGAAGGGTCCCTGGCAAGTGGCCTTCATTGGGATCACCAC GGGCCTCCTGTCACTGGCCACGGTGACGGGCAACCTCCTGGTGCTCATCTCCTTCAAGGT CAACACCGAGCTCAAGACGGTCAACAACTACTTTCTGCTGAGCCTGGCCTGCGCTGACCT CATCATCGGCACCTTCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGNAGCCAGGTGTTTGGGTCCCTGGNANACGCCATCGGCCCCGGNANAGCAGTGGGGCTG CCGACCCTCCAGACCCCTCTCCAGCCCCATGGGAACCCTGAATTCCACCAGCCCCATCCA CCTCCAGACCCTCCAAGATGGACTGAGCCAGGCGGCTGGCCAGATGGACAAGCCGGATGC CAAGGCGACCACCACCCCTGAGGAAGCCCTGGCCTGTGCCTAGAGGAAGGGGCTGCCCAC CCCGACCCCGACCCCACCCAGCACCATGAATACCTCCGCCCCGCCCGCCGTCAGCCCCAA CATCACCGTCCTGGCCCCGGGGAAGGGTCCCTGGCAAGTGGCCTTCATTGGGATCACCAC GGGCCTCCTGTCACTGGCCACGGTGACGGGCAACCTCCTGGTGCTCATCTCCTTCAAGGT CAACACCGAGCTCAAGACGGTCAACAACTACTTTCTGCTGAGCCTGGCCTGCGCTGACCT CATCATCGGCACCTTCTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 76-193, - strand, RNAz p=0.770476 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 76-193, - strand, RNAz p=0.770476 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 76-202, gnl|bosTau2|chr29 (34651570-34651445) | |
| 76-202, gnl|canFam2|chr18 (56812011-56811841) | |
| 76-202, gnl|dasNov1|scaffold_77159 (8028-8189) | |
| 76-202, gnl|echTel1|scaffold_318849 (6228-6393) | |
| 76-202, gnl|hg17|chr11 (62444701-62444864) | |
| 76-202, gnl|Hg17|chr11 (62444827-62444703) | |
| 76-202, gnl|mm7|chr19 (8345184-8345013) | |
| 76-202, gnl|Mm7|chr19 (8345056-8345180) | |
| 76-202, gnl|monDom2|scaffold_150 (1231039-1231214) | |
| 76-202, gnl|panTro1|chr9 (63439558-63439721) | |
| 76-202, gnl|rheMac2|chr14 (11165093-11164927) | |
| 76-202, gnl|rn3|chr1 (211497805-211497645) | |
| 358-497, gnl|bosTau2|chr10 (17490925-17490786) | |
| 358-497, gnl|canFam2|chr30 (3981858-3981669) | |
| 358-497, gnl|danRer3|chr20 (37150655-37150841) | |
| 358-497, gnl|dasNov1|scaffold_100305 (4214-4403) | |
| 358-497, gnl|echTel1|scaffold_257230 (11087-10898) | |
| 358-497, gnl|fr1|chrUn (81768580-81768766) | |
| 358-497, gnl|galGal2|chr5 (26963654-26963465) | |
| 358-497, gnl|hg17|chr15 (32142272-32142461) | |
| 358-497, gnl|Hg17|chr15 (32142318-32142457) | |
| 358-497, gnl|loxAfr1|scaffold_347 (175878-175689) | |
| 358-497, gnl|mm7|chr2 (112330948-112330759) | |
| 358-497, gnl|Mm7|chr2 (112330900-112330761) | |
| 358-497, gnl|monDom2|scaffold_12 (11895927-11896116) | |
| 358-497, gnl|oryCun1|scaffold_199538 (7107-6918) | |
| 358-497, gnl|panTro1|chr16 (31777929-31778118) | |
| 358-497, gnl|rheMac2|chr7 (12304873-12305062) | |
| 358-497, gnl|rn3|chr3 (98224940-98224751) | |
| 358-497, gnl|tetNig1|chr10 (4191818-4192004) | |
| 358-497, gnl|xenTro1|scaffold_117 (282127-282316) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 76-202, gnl|bosTau2|chr29 (34651570-34651445) | |
| 76-202, gnl|canFam2|chr18 (56812011-56811841) | |
| 76-202, gnl|dasNov1|scaffold_77159 (8028-8189) | |
| 76-202, gnl|echTel1|scaffold_318849 (6228-6393) | |
| 76-202, gnl|hg17|chr11 (62444701-62444864) | |
| 76-202, gnl|Hg17|chr11 (62444827-62444703) | |
| 76-202, gnl|mm7|chr19 (8345184-8345013) | |
| 76-202, gnl|Mm7|chr19 (8345056-8345180) | |
| 76-202, gnl|monDom2|scaffold_150 (1231039-1231214) | |
| 76-202, gnl|panTro1|chr9 (63439558-63439721) | |
| 76-202, gnl|rheMac2|chr14 (11165093-11164927) | |
| 76-202, gnl|rn3|chr1 (211497805-211497645) | |
| 358-497, gnl|bosTau2|chr10 (17490925-17490786) | |
| 358-497, gnl|canFam2|chr30 (3981858-3981669) | |
| 358-497, gnl|danRer3|chr20 (37150655-37150841) | |
| 358-497, gnl|dasNov1|scaffold_100305 (4214-4403) | |
| 358-497, gnl|echTel1|scaffold_257230 (11087-10898) | |
| 358-497, gnl|fr1|chrUn (81768580-81768766) | |
| 358-497, gnl|galGal2|chr5 (26963654-26963465) | |
| 358-497, gnl|hg17|chr15 (32142272-32142461) | |
| 358-497, gnl|Hg17|chr15 (32142318-32142457) | |
| 358-497, gnl|loxAfr1|scaffold_347 (175878-175689) | |
| 358-497, gnl|mm7|chr2 (112330948-112330759) | |
| 358-497, gnl|Mm7|chr2 (112330900-112330761) | |
| 358-497, gnl|monDom2|scaffold_12 (11895927-11896116) | |
| 358-497, gnl|oryCun1|scaffold_199538 (7107-6918) | |
| 358-497, gnl|panTro1|chr16 (31777929-31778118) | |
| 358-497, gnl|rheMac2|chr7 (12304873-12305062) | |
| 358-497, gnl|rn3|chr3 (98224940-98224751) | |
| 358-497, gnl|tetNig1|chr10 (4191818-4192004) | |
| 358-497, gnl|xenTro1|scaffold_117 (282127-282316) |