Non-Coding RNA Search

Bra1-olf_081_B07

Sequence:


               
               AACTGCGGNATTCCTNCGNNNCACTGTTGGCCTACCGTGCTAGGTGTCAACCAGGGCGAG
GGACTCAAGTTTGTGGAAGGGGTGGTGGACCCTGNAGGNATGGTGTCTCTGGCACTGACT
TTGACTACTCAGTCTCTAACTTTGTGGACAATCTCTATGGTTATCCCGAGGGTAAGGATA
CCCTGCGGGAGACCATCAAGTTCATGTACACAGACTGGGCCGACCGTGACAATCCTGAGA
CCCGCCGTAAAACACTGGTGGCGCTTTTCACTGACCACCAGTGGGTGGAGCCCTCAGTGG
TGACAGCTGATCTGCACGCCCGCTACGGCTCACCTACCTACTTCTACGCCTTCTACCATC
ACTGCCAGAGCCTCATGAAGCCTGCTTGGTCAGACGCAGCTCATGGGGATGAAGTACCTT
ACGTTTTTGGTGTCCCTATGGTAGGTCCCACAGACCTCTTCCCCTGCAACTTCTNCAAGA
TATGACGTTATGCTCANTGCTGTCGTCATGACCTACTGGACCAACTTTGCCAAGACCGGG
GATCCCAACAAGCCGGTCCCCCAGGACACCAAGTTGATTNACACCAANGCCAACCGCTTT
GAGGAAGTGGCCCTGGTCCAAATACAATCCCCGANNCCAACTNTACCTTTACATCGGGCC
TGAAGCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTGCGGNATTCCTNCGNNNCACTGTTGGCCTACCGTGCTAGGTGTCAACCAGGGCGAG
GGACTCAAGTTTGTGGAAGGGGTGGTGGACCCTGNAGGNATGGTGTCTCTGGCACTGACT
TTGACTACTCAGTCTCTAACTTTGTGGACAATCTCTATGGTTATCCCGAGGGTAAGGATA
CCCTGCGGGAGACCATCAAGTTCATGTACACAGACTGGGCCGACCGTGACAATCCTGAGA
CCCGCCGTAAAACACTGGTGGCGCTTTTCACTGACCACCAGTGGGTGGAGCCCTCAGTGG
TGACAGCTGATCTGCACGCCCGCTACGGCTCACCTACCTACTTCTACGCCTTCTACCATC
ACTGCCAGAGCCTCATGAAGCCTGCTTGGTCAGACGCAGCTCATGGGGATGAAGTACCTT
ACGTTTTTGGTGTCCCTATGGTAGGTCCCACAGACCTCTTCCCCTGCAACTTCTNCAAGA
TATGACGTTATGCTCANTGCTGTCGTCATGACCTACTGGACCAACTTTGCCAAGACCGGG
GATCCCAACAAGCCGGTCCCCCAGGACACCAAGTTGATTNACACCAANGCCAACCGCTTT
GAGGAAGTGGCCCTGGTCCAAATACAATCCCCGANNCCAACTNTACCTTTACATCGGGCC
TGAAGCCAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q924X0_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q924X0_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               77-356, - strand, RNAz p=0.884591

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-356, - strand, RNAz p=0.884591

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               38-540, gnl|bosTau2|chrX (21952221-21952720)
               

               
               38-540, gnl|Hg17|chrX (70170173-70170672)
               

               
               38-540, gnl|Mm7|chrX (96645575-96646074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-540, gnl|bosTau2|chrX (21952221-21952720)
               

               
               38-540, gnl|Hg17|chrX (70170173-70170672)
               

               
               38-540, gnl|Mm7|chrX (96645575-96646074)

	38-540, gnl\|bosTau2\|chrX (21952221-21952720)
	38-540, gnl\|Hg17\|chrX (70170173-70170672)
	38-540, gnl\|Mm7\|chrX (96645575-96646074)