Non-Coding RNA Search

Bra1-olf_081_D12

Sequence:


               
               TGGGTAGCCGATGCCAAGNACACCCGCCCCTTCTCCACGCAGNAGGTCCGTCTCCTCCCT
GTGCAGCCTGGAAACCATTGCCGAGGAGCCAGCCCTGGGCCCCGGTGCCCCCCTGCCCGT
GGCTGCCCACCCCCAACACTCCCCCGGNGGGCCCCAGTGCTCCGCAGGTCCCGGCGCCAA
CTCAGCAAGCCCCCCAAGGGTGGCTCTGGGAGCTTCTGGCCCCCCCCAGCTCAGGACCAG
GAGCCAAGGGGACACCGAGCCAGCCCCTGAAAGCTGGCAGTGGGCGGGTGGCAGCGGAGG
CCCCAGCAACCAGACCGACGGCAGGGGCCATCCTCGGGCTCCAGGCCCTCTGCCCAGAAG
GGCCAAGAGTGAGGGGCAGGGGTCCTCAGAGCCCCCGAGTGGGCGGTGGCCCCTGGCCGG
GCCCTGCCCCGCCATGTACTTAGATGCCACAGGTGGCGACCGGCTGTGGCAACGGCTGGA
GCCAGGCAGCCACCGTGGCAGTGTGTNCTCGCCCTCTAGCGTTTCNTCTGGTGACACAGT
NATCGACCTTTNCCTGCCGGGCCTGGGCCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGTAGCCGATGCCAAGNACACCCGCCCCTTCTCCACGCAGNAGGTCCGTCTCCTCCCT
GTGCAGCCTGGAAACCATTGCCGAGGAGCCAGCCCTGGGCCCCGGTGCCCCCCTGCCCGT
GGCTGCCCACCCCCAACACTCCCCCGGNGGGCCCCAGTGCTCCGCAGGTCCCGGCGCCAA
CTCAGCAAGCCCCCCAAGGGTGGCTCTGGGAGCTTCTGGCCCCCCCCAGCTCAGGACCAG
GAGCCAAGGGGACACCGAGCCAGCCCCTGAAAGCTGGCAGTGGGCGGGTGGCAGCGGAGG
CCCCAGCAACCAGACCGACGGCAGGGGCCATCCTCGGGCTCCAGGCCCTCTGCCCAGAAG
GGCCAAGAGTGAGGGGCAGGGGTCCTCAGAGCCCCCGAGTGGGCGGTGGCCCCTGGCCGG
GCCCTGCCCCGCCATGTACTTAGATGCCACAGGTGGCGACCGGCTGTGGCAACGGCTGGA
GCCAGGCAGCCACCGTGGCAGTGTGTNCTCGCCCTCTAGCGTTTCNTCTGGTGACACAGT
NATCGACCTTTNCCTGCCGGGCCTGGGCCTGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               142-303, - strand, RNAz p=0.984749

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               142-303, - strand, RNAz p=0.984749

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-303, gnl|bosTau2|chr16 (36470893-36470614)
               

               
               23-303, gnl|Hg17|chr1 (2467526-2467754)
               

               
               23-303, gnl|Mm7|chr4 (153974504-153974234)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-303, gnl|bosTau2|chr16 (36470893-36470614)
               

               
               23-303, gnl|Hg17|chr1 (2467526-2467754)
               

               
               23-303, gnl|Mm7|chr4 (153974504-153974234)

	23-303, gnl\|bosTau2\|chr16 (36470893-36470614)
	23-303, gnl\|Hg17\|chr1 (2467526-2467754)
	23-303, gnl\|Mm7\|chr4 (153974504-153974234)