Non-Coding RNA Search

Bra1-olf_091_B07

Sequence:


               
               tcgcttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatc
tgatacgtcctctatccgaggacaatatattaaatggatttttggagctgggagttggaa
taggagcttgctccgtccactccacgcatcgacctggtattgcagtacttccaggaacgg
tgcaccaCAGTCCAAAATTTTGTTATGTTTATGTTTTTACATTTTGAAATAAACTTGTAT
CAGAATACATCTCATTGTCCTACAGAAGTGCATTGAAAATGTGTATATTCTAGCATAACT
TTTCTAGAATTTTCTTCTTAGTAGAGAGTTCTAAAGCAAGGAAACTAAGGCATATGAGTA
AATAAATTACGATGTATAACATCTTTTTTTCATTTGCTTTAAATTAGCTACACAGTTTTC
CTCATGGAAAGGACCACTTTCCCTGTATATCCTTTCCTTCCTGAGGCAAAGATGTATGGA
TTCAACACCNAGCCTGGCATAACTTGTGACTTGTGAATTTTGACCGCACATGTTGTTCCC
ACTGGGAAGAGATGCTTTGTATCTTCCATGAACAACTTTGTTCATAACCAGTGTTTTTAA
TTGTAAGGGAGTCCTTGGTATGACTACATATTCTGCTGTTCAACCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               tcgcttctcggccttttggctaagatcaagtgtagtatctgttcttatcagtttaatatc
tgatacgtcctctatccgaggacaatatattaaatggatttttggagctgggagttggaa
taggagcttgctccgtccactccacgcatcgacctggtattgcagtacttccaggaacgg
tgcaccaCAGTCCAAAATTTTGTTATGTTTATGTTTTTACATTTTGAAATAAACTTGTAT
CAGAATACATCTCATTGTCCTACAGAAGTGCATTGAAAATGTGTATATTCTAGCATAACT
TTTCTAGAATTTTCTTCTTAGTAGAGAGTTCTAAAGCAAGGAAACTAAGGCATATGAGTA
AATAAATTACGATGTATAACATCTTTTTTTCATTTGCTTTAAATTAGCTACACAGTTTTC
CTCATGGAAAGGACCACTTTCCCTGTATATCCTTTCCTTCCTGAGGCAAAGATGTATGGA
TTCAACACCNAGCCTGGCATAACTTGTGACTTGTGAATTTTGACCGCACATGTTGTTCCC
ACTGGGAAGAGATGCTTTGTATCTTCCATGAACAACTTTGTTCATAACCAGTGTTTTTAA
TTGTAAGGGAGTCCTTGGTATGACTACATATTCTGCTGTTCAACCCTC

ncRNA annotation: 2 entry(ies)

Help | Less info


               
               1-186, RF00004;U2; (X07913.1/1061-1251), blast E-value=0
               

               
               1-186, RF00004;U2; (X07913.1/1061-1251), RaveNnA Score=192.57

ncRNA annotation: 2 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               1-186, RF00004;U2; (X07913.1/1061-1251), blast E-value=0
               

               
               1-186, RF00004;U2; (X07913.1/1061-1251), RaveNnA Score=192.57

	1-186, RF00004;U2; (X07913.1/1061-1251), blast E-value=0
	1-186, RF00004;U2; (X07913.1/1061-1251), RaveNnA Score=192.57