Non-Coding RNA Search

CorL-UMC-pd12cl-003-h12

Sequence:


               
               GAGACAGATGGGAGGACAGCTTCTAGAAGAGCCCAAGGCTCTTCATTTCAAAGGCAGCAC
CCACAACCTGCGCCTGTCCATTCATGATATTGCCCACTCCCTCTGGAAGAGCAAACTGCT
GGCCAAATATCAGGTAGGTTCCCAAGCTGAACTAAAAACATCTCCAAGAAAAAGGACCAG
GGTGATGAGACAGAAGATGTTCCCTGTCTTGAAAGTAACCCTGCTGCAGTCCTCGCTTCT
CCAAAATAGTTTGGGGTTATTTCAGGTTTTTGAAAAATACTCTAGACATACTTGAAAAAA
AATCCTTTTGTCTTAATTTCGCTTTCAAATCTGTGTACCATCATTGTTTTCTTTTGAGTA
CATAAGACTTCCAAGTCTATCATTTCAGTTCATTTTCCATTTATTTTCACTAGTTCTAGA
TCGCGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACAGATGGGAGGACAGCTTCTAGAAGAGCCCAAGGCTCTTCATTTCAAAGGCAGCAC
CCACAACCTGCGCCTGTCCATTCATGATATTGCCCACTCCCTCTGGAAGAGCAAACTGCT
GGCCAAATATCAGGTAGGTTCCCAAGCTGAACTAAAAACATCTCCAAGAAAAAGGACCAG
GGTGATGAGACAGAAGATGTTCCCTGTCTTGAAAGTAACCCTGCTGCAGTCCTCGCTTCT
CCAAAATAGTTTGGGGTTATTTCAGGTTTTTGAAAAATACTCTAGACATACTTGAAAAAA
AATCCTTTTGTCTTAATTTCGCTTTCAAATCTGTGTACCATCATTGTTTTCTTTTGAGTA
CATAAGACTTCCAAGTCTATCATTTCAGTTCATTTTCCATTTATTTTCACTAGTTCTAGA
TCGCGAGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               3-121, - strand, RNAz p=0.509539

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               3-121, - strand, RNAz p=0.509539

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-395, gnl|bosTau2|chr6 (12178316-12178709)
               

               
               3-395, gnl|Hg17|chr4 (96463506-96463108)
               

               
               3-395, gnl|Mm7|chr3 (141710646-141711033)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-395, gnl|bosTau2|chr6 (12178316-12178709)
               

               
               3-395, gnl|Hg17|chr4 (96463506-96463108)
               

               
               3-395, gnl|Mm7|chr3 (141710646-141711033)

	3-395, gnl\|bosTau2\|chr6 (12178316-12178709)
	3-395, gnl\|Hg17\|chr4 (96463506-96463108)
	3-395, gnl\|Mm7\|chr3 (141710646-141711033)