Non-Coding RNA Search

CorL-UMC-pd12cl-007-d02

Sequence:


               
               TTCAGTCAGGCCTTTGAAAATAATTGCCAAGTAATTTGGTATGGTGAAAATATACCCTGC
AGGAGAAAGAAGGCCAATTTAGATATAATGTAAATTGAAACCAATCATGAAAGACTTTGA
CGAACTTGCTAAGGAATTTGGGCAATTCAGGCTCTTTGACCTAAATTTCTTCATCTTAAA
ATAAAGGAGTTGGACAGAGCGATTTTTGAGTTCACGACCGGGTTTAAAAGTTTAAATAAG
ATTACATTAAAAAGTTCAAGAGGAAATGCTTTGTATGATATCTGGCAAGATGATATCAAT
TCCTGTAAGGATAATGCCAAGTCAGTAACTATTATTCCAAACTCCAGAACCATAACCTTT
CTTGCATCATTGTAATAGTGCCTAATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAGTCAGGCCTTTGAAAATAATTGCCAAGTAATTTGGTATGGTGAAAATATACCCTGC
AGGAGAAAGAAGGCCAATTTAGATATAATGTAAATTGAAACCAATCATGAAAGACTTTGA
CGAACTTGCTAAGGAATTTGGGCAATTCAGGCTCTTTGACCTAAATTTCTTCATCTTAAA
ATAAAGGAGTTGGACAGAGCGATTTTTGAGTTCACGACCGGGTTTAAAAGTTTAAATAAG
ATTACATTAAAAAGTTCAAGAGGAAATGCTTTGTATGATATCTGGCAAGATGATATCAAT
TCCTGTAAGGATAATGCCAAGTCAGTAACTATTATTCCAAACTCCAGAACCATAACCTTT
CTTGCATCATTGTAATAGTGCCTAATTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               160-278, + strand, RNAz p=0.888295

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-278, + strand, RNAz p=0.888295

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-388, gnl|bosTau2|chr3 (1448151-1447764)
               

               
               1-388, gnl|Hg17|chr8 (13258379-13258011)
               

               
               1-388, gnl|Mm7|chr8 (35582400-35582020)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-388, gnl|bosTau2|chr3 (1448151-1447764)
               

               
               1-388, gnl|Hg17|chr8 (13258379-13258011)
               

               
               1-388, gnl|Mm7|chr8 (35582400-35582020)

	1-388, gnl\|bosTau2\|chr3 (1448151-1447764)
	1-388, gnl\|Hg17\|chr8 (13258379-13258011)
	1-388, gnl\|Mm7\|chr8 (35582400-35582020)