Non-Coding RNA Search

Emb1-C0005178_H15

Sequence:


               
               GGTGAAAGCCTTGCAGGCAAAGAAAGCGAGCCAGGCTGTTCCCCAAAGCACCATGAATCA
CCGGGACATTGCCCGACATCAGGCTTCATCATCTGTGTTCTCCTGGCAGCAAGAAAAGAC
CCCAAGTCGTCTTTCATCCAATGCTCTAAAAACTCCAATTAGGAGAGATTTCTCTGCATC
TTATTGTTCTGAGGAACAGGAGGTGACTCCAAGTAGATCAATTCTGCAGATAGGGAAAAG
AGATGCTAATAGCAGTTTCTGTGACAATTCTAGCAGTTCTCATCTTTTGGATCAACTAAA
AGCCCAGAATCAAGAGCTGAGGAGCAAGATTGGGGAGCTGGAACTACGTCTGCAAGGACA
AGAAAAAGAAATGAAAGGCCAAGTGAATAAACTTCAAGAATTGCAGGTCCAGCTGGAAAA
AGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGAAAGCCTTGCAGGCAAAGAAAGCGAGCCAGGCTGTTCCCCAAAGCACCATGAATCA
CCGGGACATTGCCCGACATCAGGCTTCATCATCTGTGTTCTCCTGGCAGCAAGAAAAGAC
CCCAAGTCGTCTTTCATCCAATGCTCTAAAAACTCCAATTAGGAGAGATTTCTCTGCATC
TTATTGTTCTGAGGAACAGGAGGTGACTCCAAGTAGATCAATTCTGCAGATAGGGAAAAG
AGATGCTAATAGCAGTTTCTGTGACAATTCTAGCAGTTCTCATCTTTTGGATCAACTAAA
AGCCCAGAATCAAGAGCTGAGGAGCAAGATTGGGGAGCTGGAACTACGTCTGCAAGGACA
AGAAAAAGAAATGAAAGGCCAAGTGAATAAACTTCAAGAATTGCAGGTCCAGCTGGAAAA
AGCAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61838217|ref|XP_588173.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61838217|ref|XP_588173.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               18-136, - strand, RNAz p=0.585015

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               18-136, - strand, RNAz p=0.585015

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-314, gnl|bosTau2|chr16 (51239318-51239614)
               

               
               18-314, gnl|Hg17|chr1 (211182388-211182684)
               

               
               18-314, gnl|Mm7|chr1 (189212824-189212533)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-314, gnl|bosTau2|chr16 (51239318-51239614)
               

               
               18-314, gnl|Hg17|chr1 (211182388-211182684)
               

               
               18-314, gnl|Mm7|chr1 (189212824-189212533)

	18-314, gnl\|bosTau2\|chr16 (51239318-51239614)
	18-314, gnl\|Hg17\|chr1 (211182388-211182684)
	18-314, gnl\|Mm7\|chr1 (189212824-189212533)