Non-Coding RNA Search

Emb1-C0005178_P02

Sequence:


               
               AGGGAATAACATGAGCAAAGGCACAGAGCTGTAAAAGGGCTTTATTGTATTCTGGGCAGG
CTGTCCTGAGGAGCTGATGTGTGGCAGGATGCGTGGAGAAGAGAAGAAAGGGATGAAGCT
GGAATGGAACCTTACCCTTCTTCGGACTTGGGACTTTATTCTGTAGTTAGTAGGGTACCA
CTAGAGGCTTCTGAAAAGCATGGCATAGTTAATTCTGATATAGAAATAATTCTCTTGTAG
TAGTAGTATTTAGGATATACTGAAAGGGAGAAAGCCAGAATATCTGGGAATCTAGTTAAG
AAGCCAGTGTCTGTTCTTCCTTATATATAAAGATTGTTGGGAGGATCAAATCAAATAAGA
GCATTTCTGCATTAGACTCTTGACTGCAGGAACGAGCAATACTTAAGTTACAGATAGATG
AGGATACCTAAGCACTGATTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGAATAACATGAGCAAAGGCACAGAGCTGTAAAAGGGCTTTATTGTATTCTGGGCAGG
CTGTCCTGAGGAGCTGATGTGTGGCAGGATGCGTGGAGAAGAGAAGAAAGGGATGAAGCT
GGAATGGAACCTTACCCTTCTTCGGACTTGGGACTTTATTCTGTAGTTAGTAGGGTACCA
CTAGAGGCTTCTGAAAAGCATGGCATAGTTAATTCTGATATAGAAATAATTCTCTTGTAG
TAGTAGTATTTAGGATATACTGAAAGGGAGAAAGCCAGAATATCTGGGAATCTAGTTAAG
AAGCCAGTGTCTGTTCTTCCTTATATATAAAGATTGTTGGGAGGATCAAATCAAATAAGA
GCATTTCTGCATTAGACTCTTGACTGCAGGAACGAGCAATACTTAAGTTACAGATAGATG
AGGATACCTAAGCACTGATTTCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               210-329, - strand, RNAz p=0.72467

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               210-329, - strand, RNAz p=0.72467

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               33-443, gnl|bosTau2|chr10 (38717635-38718015)
               

               
               33-443, gnl|Hg17|chr15 (53409997-53410398)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-443, gnl|bosTau2|chr10 (38717635-38718015)
               

               
               33-443, gnl|Hg17|chr15 (53409997-53410398)

	33-443, gnl\|bosTau2\|chr10 (38717635-38718015)
	33-443, gnl\|Hg17\|chr15 (53409997-53410398)