Non-Coding RNA Search

Emb1-C0005180_D16

Sequence:


               
               GGTAGAACAAGATCAAGTGCTTGAGGCTAAATTAGAGGAAGCTGAAAGACTGGCAACAGA
ATTGGAAAAATGGAAGGAAAAATGCAAAGATCTGGAAACCAAAAGCAATGAAAGGTCAAA
TAAAGAACTTGAGGATAACACAGATATACTTAATATAAAGCTTAGTAAGCTTCAAGATGA
GTTACAGGAATCTGAACAGAAATATAAAGCTGATAGAAAAAAATGGTTAGAAGAAAAAAT
GATGCTTATCACTCAAGCAAAAGAAGCCGAAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTAGAACAAGATCAAGTGCTTGAGGCTAAATTAGAGGAAGCTGAAAGACTGGCAACAGA
ATTGGAAAAATGGAAGGAAAAATGCAAAGATCTGGAAACCAAAAGCAATGAAAGGTCAAA
TAAAGAACTTGAGGATAACACAGATATACTTAATATAAAGCTTAGTAAGCTTCAAGATGA
GTTACAGGAATCTGAACAGAAATATAAAGCTGATAGAAAAAAATGGTTAGAAGAAAAAAT
GATGCTTATCACTCAAGCAAAAGAAGCCGAAGAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               168-268, - strand, RNAz p=0.541251

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               168-268, - strand, RNAz p=0.541251

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-270, gnl|bosTau2|chr21 (32329726-32329457)
               

               
               1-270, gnl|Hg17|chr10 (91501150-91504337)
               

               
               1-270, gnl|Mm7|chr19 (34657322-34660802)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-270, gnl|bosTau2|chr21 (32329726-32329457)
               

               
               1-270, gnl|Hg17|chr10 (91501150-91504337)
               

               
               1-270, gnl|Mm7|chr19 (34657322-34660802)

	1-270, gnl\|bosTau2\|chr21 (32329726-32329457)
	1-270, gnl\|Hg17\|chr10 (91501150-91504337)
	1-270, gnl\|Mm7\|chr19 (34657322-34660802)