Non-Coding RNA Search

Emb1-C0005180_E14

Sequence:


               
               AGCAATTGGTAGCCCTCAGATCATAAACCATGTGTGAGGGAGAGACTTAGAATTCCATGG
AACCATGGGATTTTTAAACCACACATGAAACCTAGAGATCCTAGAAAACTCTGGATGTGG
AAAGTTAAAACCTTCCTCCAGCCTTACCCAGCTCGTCAGAGGCAGAGCTCAGATGAGAAC
TCAGGTTTCCTGGCTCTCAAGTCAAACCTCTTTTCAAGATCACGTCTCAGATTCTTCCAT
AGGAAGTTGAATTAAATTCCGCGCCTCACGTTGCCTGTGGTTGGAAACATGAGCTTCCTG
GTATCCCACCATCCATGGGTCAAGGTGGCCTGTCGGCCAGCACTGATGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAATTGGTAGCCCTCAGATCATAAACCATGTGTGAGGGAGAGACTTAGAATTCCATGG
AACCATGGGATTTTTAAACCACACATGAAACCTAGAGATCCTAGAAAACTCTGGATGTGG
AAAGTTAAAACCTTCCTCCAGCCTTACCCAGCTCGTCAGAGGCAGAGCTCAGATGAGAAC
TCAGGTTTCCTGGCTCTCAAGTCAAACCTCTTTTCAAGATCACGTCTCAGATTCTTCCAT
AGGAAGTTGAATTAAATTCCGCGCCTCACGTTGCCTGTGGTTGGAAACATGAGCTTCCTG
GTATCCCACCATCCATGGGTCAAGGTGGCCTGTCGGCCAGCACTGATGGGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-147, + strand, RNAz p=0.998556

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-147, + strand, RNAz p=0.998556

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-348, gnl|bosTau2|chr12 (40658390-40658737)
               

               
               1-348, gnl|Hg17|chr13 (98388742-98388386)
               

               
               1-348, gnl|Mm7|chr14 (116080217-116079866)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr12 (40658390-40658737)
               

               
               1-348, gnl|Hg17|chr13 (98388742-98388386)
               

               
               1-348, gnl|Mm7|chr14 (116080217-116079866)

	1-348, gnl\|bosTau2\|chr12 (40658390-40658737)
	1-348, gnl\|Hg17\|chr13 (98388742-98388386)
	1-348, gnl\|Mm7\|chr14 (116080217-116079866)