Non-Coding RNA Search

Emb1-C0005180_O01

Sequence:


               
               GTTTCAGGAGGGAGAGTCTTCTGCCAACTCAAAAAATACATGCATCTGtgttcattagag
ggctgtttacaatagccaaggcgtggcaacagcctaaatgtccaccaacagatgagtgga
taaggaagatgtggtacatatatgcattggaatattacttggccatcaaaaagaaataat
gccatgtgtagcaacacagatggacctagagattagcatactaactgaaggaagtcagAG
AAAGAGATATCATATATCACTTATATATGGAATCTAAAAAATGATACAAAGGAACTTATT
TACAAAACAGGAGCAGACTCACAGACATAAAAAACAAATTTATGGTTACCAAAGGGAGAA
AGGGGGTGGAGGGATACATTAGGAGTTTGGGATTAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTCAGGAGGGAGAGTCTTCTGCCAACTCAAAAAATACATGCATCTGtgttcattagag
ggctgtttacaatagccaaggcgtggcaacagcctaaatgtccaccaacagatgagtgga
taaggaagatgtggtacatatatgcattggaatattacttggccatcaaaaagaaataat
gccatgtgtagcaacacagatggacctagagattagcatactaactgaaggaagtcagAG
AAAGAGATATCATATATCACTTATATATGGAATCTAAAAAATGATACAAAGGAACTTATT
TACAAAACAGGAGCAGACTCACAGACATAAAAAACAAATTTATGGTTACCAAAGGGAGAA
AGGGGGTGGAGGGATACATTAGGAGTTTGGGATTAGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56492562|emb|CAI01941.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56492562|emb|CAI01941.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               25-178, - strand, RNAz p=0.958741

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               25-178, - strand, RNAz p=0.958741

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               25-397, gnl|bosTau2|chr10 (15818197-15817813)
               


               
               26-395, gnl|bosTau2|chr10 (19894996-19895375)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-397, gnl|bosTau2|chr10 (15818197-15817813)
               


               
               26-395, gnl|bosTau2|chr10 (19894996-19895375)

	25-397, gnl\|bosTau2\|chr10 (15818197-15817813)

	26-395, gnl\|bosTau2\|chr10 (19894996-19895375)