Non-Coding RNA Search

Emb1-C0005181_A06

Sequence:


               
               GAGGTACACTCCATTCAGAGGGAATCCTGAATCAGGGTCGTTGAGAGTGTTCATTTGGTT
CTGTGCTGAAATTTATTTCTGCTCCGGATATTTCTTTCAGAAGGATTTTTTTTCTTTTTT
TCTTTTTTTTTACGTTGGCAAAACTAAGCATTTTATTCATAAGCGCTCTCATAATAAAGC
TTTTTCAGTCCAGACAGAGGAGGAAATTTGCAAAATGCATCAGGAAAGTGTGCCAATTGT
TTTTCAAGCCATCGTGTATGTGGAGCAAGTATTGTATTCATTAGTGCTTGCAAACCTATT
TAATGATGCAAAAGTAAAACTGACCTCTCCCCTTTGGTACACAGATGTATAAACTTTATG
GGAGTACACCCTAAGGTAGAAACTTATTGGAGTAACTCTTAGAACGGACAGGGTTGGTCA
TAAACAGTGACGCAAATACCCCGCAATTATGTACACTCAATTATTTGGAAGGGAAGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTACACTCCATTCAGAGGGAATCCTGAATCAGGGTCGTTGAGAGTGTTCATTTGGTT
CTGTGCTGAAATTTATTTCTGCTCCGGATATTTCTTTCAGAAGGATTTTTTTTCTTTTTT
TCTTTTTTTTTACGTTGGCAAAACTAAGCATTTTATTCATAAGCGCTCTCATAATAAAGC
TTTTTCAGTCCAGACAGAGGAGGAAATTTGCAAAATGCATCAGGAAAGTGTGCCAATTGT
TTTTCAAGCCATCGTGTATGTGGAGCAAGTATTGTATTCATTAGTGCTTGCAAACCTATT
TAATGATGCAAAAGTAAAACTGACCTCTCCCCTTTGGTACACAGATGTATAAACTTTATG
GGAGTACACCCTAAGGTAGAAACTTATTGGAGTAACTCTTAGAACGGACAGGGTTGGTCA
TAAACAGTGACGCAAATACCCCGCAATTATGTACACTCAATTATTTGGAAGGGAAGTCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               314-431, - strand, RNAz p=0.544956

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               314-431, - strand, RNAz p=0.544956

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-479, gnl|bosTau2|chr5 (30923452-30922984)
               

               
               1-479, gnl|Hg17|chr12 (64574455-64574916)
               

               
               1-479, gnl|Mm7|chr10 (119813477-119813008)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-479, gnl|bosTau2|chr5 (30923452-30922984)
               

               
               1-479, gnl|Hg17|chr12 (64574455-64574916)
               

               
               1-479, gnl|Mm7|chr10 (119813477-119813008)

	1-479, gnl\|bosTau2\|chr5 (30923452-30922984)
	1-479, gnl\|Hg17\|chr12 (64574455-64574916)
	1-479, gnl\|Mm7\|chr10 (119813477-119813008)