Emb1-C0005182_E19
|
CCGCtttttttttttttttttttttttttttttttttttttttttttttggttttttttt
tttttttGAAAAGCCCGCAAAAAGCACTTTTATTGGAATAAAAAAACTTGGAACCCCTAT
GTAGTGGAGGGGGGGGGGGAGGAGGCAACAATTTCTCCCACCAAGGCACTACCCGGGACA
ACAAAGGGGGGAGAGGGGGAAGGAAAAACCCGGAAAACTCTGAGGGCAGCGGGGGGGGCT
GAGCCTCAAAAAACAGGAGATGCTGAAGCTGTGATGACCAACATCTTTTTCTTAAAACAA
CCCCCAAGGATTTGTCATGGGGGGGGGGCTTTCATGGGGGGTAAGGGGCCACAAACAGCC
CCCTCAATTTAAACGGTCGAATAAAGGTCCTAAAATTTAAGAAGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGCtttttttttttttttttttttttttttttttttttttttttttttggttttttttt
tttttttGAAAAGCCCGCAAAAAGCACTTTTATTGGAATAAAAAAACTTGGAACCCCTAT
GTAGTGGAGGGGGGGGGGGAGGAGGCAACAATTTCTCCCACCAAGGCACTACCCGGGACA
ACAAAGGGGGGAGAGGGGGAAGGAAAAACCCGGAAAACTCTGAGGGCAGCGGGGGGGGCT
GAGCCTCAAAAAACAGGAGATGCTGAAGCTGTGATGACCAACATCTTTTTCTTAAAACAA
CCCCCAAGGATTTGTCATGGGGGGGGGGCTTTCATGGGGGGTAAGGGGCCACAAACAGCC
CCCTCAATTTAAACGGTCGAATAAAGGTCCTAAAATTTAAGAAGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
68-404, gnl|bosTau2|chr13 (41321196-41321542) |
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68-404, gnl|canFam2|chr24 (22613859-22613612) |
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68-404, gnl|dasNov1|scaffold_1490 (4088-3862) |
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68-404, gnl|echTel1|scaffold_305716 (173829-174058) |
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68-404, gnl|galGal2|chr20 (9463510-9463267) |
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68-404, gnl|hg17|chr20 (1297615-1297850) |
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68-404, gnl|Hg17|chr20 (1297625-1297959) |
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68-404, gnl|loxAfr1|scaffold_76112 (6943-7186) |
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68-404, gnl|mm7|chr2 (151302557-151302325) |
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68-404, gnl|Mm7|chr2 (151302545-151302214) |
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68-404, gnl|monDom2|scaffold_38 (3724569-3724822) |
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68-404, gnl|oryCun1|scaffold_171282 (13712-13478) |
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68-404, gnl|panTro1|chr21 (1329564-1329799) |
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68-404, gnl|rheMac2|chr10 (34624684-34624923) |
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68-404, gnl|rn3|chr3 (141786379-141786149) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
68-404, gnl|bosTau2|chr13 (41321196-41321542) |
|
68-404, gnl|canFam2|chr24 (22613859-22613612) |
|
68-404, gnl|dasNov1|scaffold_1490 (4088-3862) |
|
68-404, gnl|echTel1|scaffold_305716 (173829-174058) |
|
68-404, gnl|galGal2|chr20 (9463510-9463267) |
|
68-404, gnl|hg17|chr20 (1297615-1297850) |
|
68-404, gnl|Hg17|chr20 (1297625-1297959) |
|
68-404, gnl|loxAfr1|scaffold_76112 (6943-7186) |
|
68-404, gnl|mm7|chr2 (151302557-151302325) |
|
68-404, gnl|Mm7|chr2 (151302545-151302214) |
|
68-404, gnl|monDom2|scaffold_38 (3724569-3724822) |
|
68-404, gnl|oryCun1|scaffold_171282 (13712-13478) |
|
68-404, gnl|panTro1|chr21 (1329564-1329799) |
|
68-404, gnl|rheMac2|chr10 (34624684-34624923) |
|
68-404, gnl|rn3|chr3 (141786379-141786149) |
