Non-Coding RNA Search

Emb1-C0005182_L06

Sequence:


               
               TCAGATAAATTAAATTTATTTATATTCCAACACTTTAAATAATTGCTATAGAAGATAATA
ATGAGTTTTAAAAATGTCTTTAATGTTGCTTCTTTATCTTTCCAAATAAACACTAAAACA
ATAGCTCTAGTAGAGAGTGTTGGGTGTTGTGGGTATTTAAACTGCTAACTGAAATGTTAA
ACTCTGTTGTATGGAATTACTTTTGGAAGCTGATTATTAAGCTGATTTTGCCATATTGTT
TTAAATGAGCATCGGGCTGATAAAATTCCAACAAATAGCAAGCTTAAGTAACACATGAAG
GTGGGGGAAAATAACATGAACTAGATATTTTTGAAAAGAAAACTATCTTTTGCAAATATG
AATTAGATATTAAGTTGAAGTTCATGACTGCTCTAAAATTAGAATGTTCATTTTAAATAC
TCCAAAGGGCCAAGTGCTGAAAATCTGGACAAAATGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATAAATTAAATTTATTTATATTCCAACACTTTAAATAATTGCTATAGAAGATAATA
ATGAGTTTTAAAAATGTCTTTAATGTTGCTTCTTTATCTTTCCAAATAAACACTAAAACA
ATAGCTCTAGTAGAGAGTGTTGGGTGTTGTGGGTATTTAAACTGCTAACTGAAATGTTAA
ACTCTGTTGTATGGAATTACTTTTGGAAGCTGATTATTAAGCTGATTTTGCCATATTGTT
TTAAATGAGCATCGGGCTGATAAAATTCCAACAAATAGCAAGCTTAAGTAACACATGAAG
GTGGGGGAAAATAACATGAACTAGATATTTTTGAAAAGAAAACTATCTTTTGCAAATATG
AATTAGATATTAAGTTGAAGTTCATGACTGCTCTAAAATTAGAATGTTCATTTTAAATAC
TCCAAAGGGCCAAGTGCTGAAAATCTGGACAAAATGGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               303-414, - strand, RNAz p=0.577062

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               303-414, - strand, RNAz p=0.577062

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-458, gnl|bosTau2|chr6 (5274527-5274991)
               

               
               3-458, gnl|Hg17|chr4 (114201957-114202443)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-458, gnl|bosTau2|chr6 (5274527-5274991)
               

               
               3-458, gnl|Hg17|chr4 (114201957-114202443)

	3-458, gnl\|bosTau2\|chr6 (5274527-5274991)
	3-458, gnl\|Hg17\|chr4 (114201957-114202443)