Non-Coding RNA Search

Emb1-C0005183_N09

Sequence:


               
               TGTTCTCTAGGGATCAGAATGTTTCACATTTTTATACTCTTGGCTCTTGTCTAGCTTGCT
TTCATGGCAAATTGTGTGACTTCAGTAGTCAAAATAAAACATAAGCCTCTGTTGTTGTGG
TTTCTAAATTTCTGAAGTTTGAATTTCCCACTAACAAGTTAGGAAACGTTTGGTTTCCCA
AGCATACCACGTTAGCCACTGCCTCTGTGCAGGCAAACAGACTACAGGGAGGTGAAAACC
AGTGAACTCATCCACTCTGGGCACATATGACTGCTCCCTGCTTTGGCCTTTTATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTCTCTAGGGATCAGAATGTTTCACATTTTTATACTCTTGGCTCTTGTCTAGCTTGCT
TTCATGGCAAATTGTGTGACTTCAGTAGTCAAAATAAAACATAAGCCTCTGTTGTTGTGG
TTTCTAAATTTCTGAAGTTTGAATTTCCCACTAACAAGTTAGGAAACGTTTGGTTTCCCA
AGCATACCACGTTAGCCACTGCCTCTGTGCAGGCAAACAGACTACAGGGAGGTGAAAACC
AGTGAACTCATCCACTCTGGGCACATATGACTGCTCCCTGCTTTGGCCTTTTATG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               69-264, - strand, RNAz p=0.975623

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               69-264, - strand, RNAz p=0.975623

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-295, gnl|bosTau2|chr1 (23588614-23588323)
               

               
               2-295, gnl|Hg17|chr3 (101068066-101067778)
               

               
               2-295, gnl|Mm7|chr16 (57419753-57420056)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-295, gnl|bosTau2|chr1 (23588614-23588323)
               

               
               2-295, gnl|Hg17|chr3 (101068066-101067778)
               

               
               2-295, gnl|Mm7|chr16 (57419753-57420056)

	2-295, gnl\|bosTau2\|chr1 (23588614-23588323)
	2-295, gnl\|Hg17\|chr3 (101068066-101067778)
	2-295, gnl\|Mm7\|chr16 (57419753-57420056)