Non-Coding RNA Search

Emb1-C0005184_B04

Sequence:


               
               GATAATATTGGATCCATCCTTTGTACCTTTACATTAGGATAAATTCTAAATAGGTCAAAG
ATTTAAATGTAAAACTGAAACCATACACATATTAGGGAAAAACAAAGGTAAGTTACTTAC
AGCCTGTTAGGAAGGAAAATTTTTCTAACTATGACCCTAGATCCAGAAGCAGTAAGGAAA
AGGATTGATAAATTTGGTTACATTAAAAAAAAAATTTTTTTTTCATGGCAAAGTATGCTT
TCCATAAGCAAAGTAAAAGGACAGTAAGAAACTGCCAAAAAAAATTGTTAGATTATATTG
CAAAGGTACTAGCCCTAGTTTGTAAAGAGCTTCTAAAAATGGAGAAGACCAACAACCTTA
GAAATTGTTTAAACTGTATCTCTTAGAGATGAACCAACATTTACAGAAAAAGAAATGCAA
ATGGCTTAATCATATGAAAATATGCTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAATATTGGATCCATCCTTTGTACCTTTACATTAGGATAAATTCTAAATAGGTCAAAG
ATTTAAATGTAAAACTGAAACCATACACATATTAGGGAAAAACAAAGGTAAGTTACTTAC
AGCCTGTTAGGAAGGAAAATTTTTCTAACTATGACCCTAGATCCAGAAGCAGTAAGGAAA
AGGATTGATAAATTTGGTTACATTAAAAAAAAAATTTTTTTTTCATGGCAAAGTATGCTT
TCCATAAGCAAAGTAAAAGGACAGTAAGAAACTGCCAAAAAAAATTGTTAGATTATATTG
CAAAGGTACTAGCCCTAGTTTGTAAAGAGCTTCTAAAAATGGAGAAGACCAACAACCTTA
GAAATTGTTTAAACTGTATCTCTTAGAGATGAACCAACATTTACAGAAAAAGAAATGCAA
ATGGCTTAATCATATGAAAATATGCTCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               159-427, - strand, RNAz p=0.917409

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               159-427, - strand, RNAz p=0.917409

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-448, gnl|bosTau2|chr19 (2640565-2641002)
               

               
               1-448, gnl|Hg17|chr17 (10563607-10564016)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-448, gnl|bosTau2|chr19 (2640565-2641002)
               

               
               1-448, gnl|Hg17|chr17 (10563607-10564016)

	1-448, gnl\|bosTau2\|chr19 (2640565-2641002)
	1-448, gnl\|Hg17\|chr17 (10563607-10564016)