Non-Coding RNA Search

Emb1-C0005185_B06

Sequence:


               
               GGATTCAGCATTTCGTGGGATTTGTACCATGATCAGTGTGAATCCCAGTGGAGTAATCCA
AGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAATCCAAAAGATGATCTGAG
AGACATGTTCTGTAAGATCCTTCACGGATTTAAAAATCAAGTTGGGGATGAAAATTGGAG
GCGTTTCTCTGACCAGTTTCCACTTCCCTTAAAAGAACGTCTTGCAGCTTTTTATGGTGT
TTAATCTCATACACTTAGGCTGCAGTCTCAAAATTAGGGGTCCTTCAGTCTTGGAGACTA
TGAGGGAGCCTCTGCACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAACCAG
TAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATTCAGCATTTCGTGGGATTTGTACCATGATCAGTGTGAATCCCAGTGGAGTAATCCA
AGATTTTATATTTTTTTGTGATGCTGTTGCATCATGGATTAATCCAAAAGATGATCTGAG
AGACATGTTCTGTAAGATCCTTCACGGATTTAAAAATCAAGTTGGGGATGAAAATTGGAG
GCGTTTCTCTGACCAGTTTCCACTTCCCTTAAAAGAACGTCTTGCAGCTTTTTATGGTGT
TTAATCTCATACACTTAGGCTGCAGTCTCAAAATTAGGGGTCCTTCAGTCTTGGAGACTA
TGAGGGAGCCTCTGCACCCAGGGAAAATGTTACCCTTTACAGGGGGGAAGGGTAAACCAG
TAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61874564|ref|XP_611648.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61874564|ref|XP_611648.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               164-281, + strand, RNAz p=0.721168

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               164-281, + strand, RNAz p=0.721168

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_002270, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_002270, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               135-281, gnl|bosTau2|chr20 (5292723-5292869)
               

               
               135-281, gnl|Hg17|chr5 (72236884-72237030)
               

               
               135-281, gnl|Mm7|chr13 (95916362-95916216)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-281, gnl|bosTau2|chr20 (5292723-5292869)
               

               
               135-281, gnl|Hg17|chr5 (72236884-72237030)
               

               
               135-281, gnl|Mm7|chr13 (95916362-95916216)

	135-281, gnl\|bosTau2\|chr20 (5292723-5292869)
	135-281, gnl\|Hg17\|chr5 (72236884-72237030)
	135-281, gnl\|Mm7\|chr13 (95916362-95916216)